| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4152 |
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| Symbol | |
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| ID | 4175941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4992428 |
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| End bp | 4994416 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638057188 |
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| Product | histidine kinase |
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| Protein accession | YP_663705 |
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| Protein GI | 109900450 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAACT CTATCTCTCG CTTACTACTC GTCGAAGACG ACGAAGATGA TTACATATTA
GCGCGAGATT ATATCGAGCA ACTCAGCACG CTTGAGTTTG AAATTGATTG GGTCACAAAT
CAGCATGATG CGTTAGCAAA AATGGCTGAA AATCAGCACG ATATCTGTTT GTTGGACTAC
CAGCTTGGGG CTGAAAACGG TCTAACAGTG TTAAAACTAG CAATTGAAGC TGGGTTTACG
TCACCTATTA TTATGCTCAC AGGCCAAGCT GATGAAGAAG TAGATATGGC TGCGCTGGAT
GCAGGCGCGG TTGACTATAT TATCAAAAGC GAATTGAGCA GTAGTCGCTT TGCACGGGCT
ATCCGCTACG CTTTGGCGCG GCGAGAGATT GAAAAAGAAC GTGTCGACAG ATTAAAAGCA
GAAGCCGAAA ACCGCTCTAA AGACAGATTT TTAGCGCACT TAAGCCATGA GCTACGTACG
CCGCTAACGT CGATTTTAGG TTACACCGAA TTGTTGATGG ACTCTAAAAT CGGTCAATCT
GCTCAGTCCG AGTTGTCGAT TGTATTGAAC AACAGTAAAC ATTTATTAAG CCTGCTTAAT
AACATGCTCG ACTTGTCGAA AATAGCCGCC GATAAGCTTG AGCTTAATCT CAGTGAAGTC
AATTTAGATG CTTTAATTGC TGATGTTTAC GCCCTGATGA ATATACCTGC GACAGATAAA
GGTCTGACCC TTTCCGTCAT TTCAGATACC CCTCTACCAT TGAAAATTAC CACCGACGCG
ACCCGTTTTC GCCAAGTGTT GATTAACCTG ATAAGTAATG CCATCAAGTT TACAGAGCAA
GGCAGCGTCA CCTTACGTCT GTGGTGTGAA GACAAACCCG GTTGTGAATT TTTACACTTT
TCTGTGACTG ATACCGGTAT CGGTATCCCT GCAAATCAAC TCAATAGTGT GTTTAAACCA
TTTGAGCAGG TTGCTGATGT AGTCTCAAGA CGGCAAGGCG GAAGCGGGCT AGGCCTTGCA
ATATGTAATG AGCTAGTCGC TAAGATGGGC GGAGAAGTTA GCTTGCATTC GACCTTTGGC
GAAGGAAGCT GCTTCACGGC TTTTATTCAA ACAGGAGACA CTAAGCGCTC TCCACACGAG
TTACTGAGTT TCGATGCAAA ACCATCAACG ATGAAAGAAG TGAAAACGCT CAATTACGAG
GGGCGTGTGC TAGTCGTAGA TGATGTAAAT GACATTCGCA TGTTGGTAGG GCATATGGTG
CAAAATTCTG GCCTGAAAGT GGAATATGGG CGAAACGGAT TAGAAGCGTT AGATAAAGTC
ACTGATGCAA TCAATGACGG CGACCCATAC GACTTGGTCT TGATTGATAT CCACATGCCT
GTGATGAATG GCTCAGAAGC CATCAAGCAA ATTCGCTCCA GTGGCATCCA TTTCCCAGTG
GTGGCCATGA CCGCAGCCAC TATGAAAGGT GTGCGTGACC AATTAATTTC ACAGGGTTTT
ACTAACGTTC TTGAAAAACC AATCAACCAT GATGCGTTAC TGAAGGTGCT CGATGCACAC
CTGACAGCGG TTAGTGAGCC CATTCAAGTC GAAACTACCG ATGCGCATGA CAACGATGCC
TCACAGCAGG ATGAAAGTTC CGAAAGGCAA CATTTCTTGC TGGTTGAGGA CGATGTGGAT
GCCGCTGATA TTACGGCCCT ATTGTTAGAA AGTTTAGGTA TAGATGTTCA TGTTGCCCAT
TCAGGCCAAG AATGTATGGA CGTATTCAAT CAGCGCAATG ATTGGAGCAA AGTGTTGATG
GATTTAAATT TGCCAGATGC TAGTGGGTTA AATTTGGCCA AAGAGATTCA TAAAACATCT
CCTCAATTAG AATTGGTGTT ATTGAGTGGC GAAGAGCCCG ATGCACAGAG TATGGCAGAT
GCCGATATTA CGAAATTTAT TCTAAAACCC ATCAATAAAA AAGTGCTAAG CGATTTGGTG
GAAGACTAG
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| Protein sequence | MSNSISRLLL VEDDEDDYIL ARDYIEQLST LEFEIDWVTN QHDALAKMAE NQHDICLLDY
QLGAENGLTV LKLAIEAGFT SPIIMLTGQA DEEVDMAALD AGAVDYIIKS ELSSSRFARA
IRYALARREI EKERVDRLKA EAENRSKDRF LAHLSHELRT PLTSILGYTE LLMDSKIGQS
AQSELSIVLN NSKHLLSLLN NMLDLSKIAA DKLELNLSEV NLDALIADVY ALMNIPATDK
GLTLSVISDT PLPLKITTDA TRFRQVLINL ISNAIKFTEQ GSVTLRLWCE DKPGCEFLHF
SVTDTGIGIP ANQLNSVFKP FEQVADVVSR RQGGSGLGLA ICNELVAKMG GEVSLHSTFG
EGSCFTAFIQ TGDTKRSPHE LLSFDAKPST MKEVKTLNYE GRVLVVDDVN DIRMLVGHMV
QNSGLKVEYG RNGLEALDKV TDAINDGDPY DLVLIDIHMP VMNGSEAIKQ IRSSGIHFPV
VAMTAATMKG VRDQLISQGF TNVLEKPINH DALLKVLDAH LTAVSEPIQV ETTDAHDNDA
SQQDESSERQ HFLLVEDDVD AADITALLLE SLGIDVHVAH SGQECMDVFN QRNDWSKVLM
DLNLPDASGL NLAKEIHKTS PQLELVLLSG EEPDAQSMAD ADITKFILKP INKKVLSDLV
ED
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