Gene Patl_4148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4148 
Symbol 
ID4175937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4986926 
End bp4987471 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID638057184 
ProductMarR family transcriptional regulator 
Protein accessionYP_663701 
Protein GI109900446 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAGC AGGTACCCAT AATGAAAAAA TACGATGAGT TATTAGTGTC GCTAAGACGC 
GTAATAAGGG CAATTGACCT TTACTCCAAG AAGCTCAGTA AAGAGTCTGG GTTAACCAGC
CCCCAGCTTA TCGTCATGCA AGAAATTGCC AATAACGATG ACGTTATGGT CAAAGATATT
GCTAATCACA TTAACCTTAG TTCAGCGACT GTCACTAGCA TACTAGACAG ACTTGAAGCT
CGAGGTTACG TGGTGCGAGA ACGTTCACAA ATTGATAAGC GCAAAGTAGG TGTACGTTTA
ACCGAGTCGG GGTCAACTGC GTTTAAAAAT GCTCCCACTT TATTGCAAGA GCATTTCATT
AATCGCTTCG AGTCGTTAGA TGAGTGGGAG CAAACCCAAC TAGTATCAAC GATGCAACGC
ATCGCTAAAA TGATGGATGC TGAAGCGCTC GACGCCGCAC CATTGTTGCA AGTTGGGCAG
ATTCACACAT TGACTGCCAC AGTCGAAGCA ACGACTACGC AAACTAGCGC CGGTACAAAT
AAATAA
 
Protein sequence
MTKQVPIMKK YDELLVSLRR VIRAIDLYSK KLSKESGLTS PQLIVMQEIA NNDDVMVKDI 
ANHINLSSAT VTSILDRLEA RGYVVRERSQ IDKRKVGVRL TESGSTAFKN APTLLQEHFI
NRFESLDEWE QTQLVSTMQR IAKMMDAEAL DAAPLLQVGQ IHTLTATVEA TTTQTSAGTN
K