| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4144 |
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| Symbol | |
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| ID | 4175933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4980914 |
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| End bp | 4982332 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057180 |
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| Product | Na+/H+ antiporter NhaA |
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| Protein accession | YP_663697 |
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| Protein GI | 109900442 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.375457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC TTCAAGACAA AGATCGCGAA CTGGCCCCCT TAGAGCGAAA GTTTAATCAC
TTCATTTGCT CGTTCGAGCA GTTTTTTAAA AGCCAAGCGA CTGCCAGTAT CACTTTACTG
CTAGCCGCTA TTGCCGCCAT GGTGATTGCA AACTCACAGT GGCATGAAGG CTACGAAGAG
ATAAGTCACA TGGCATTTAG TATCTCCTTG GGGGATTTTG CCATTAGTCA TTCCCTGCAT
ACATGGGTGA ATGACGGCTT AATGGTGTTG TTCTTCTTCT TGCTTGGCTT AGAGATCAAA
TACGAATGCT TGGTGGGGGA TCTAAAAGAT TTTCGTGACT CAAGTCTTGT TATCGCCATG
GCAATTGGCG GTATGTTGCT CCCCGCTGGC ATTTACGCTG GGGTTGCGCT AACCGGAGTG
GACGAAGCGT TGCGTGGTTG GGGAATACCC ATGGCCACTG ATACTGCCTT TGCATTGGGC
ATTCTGGCAT TACTTGGCAG TAAAGCACCG CGCTCGGCAG CGGTAACCTT GTCAGCTTTA
GCGATTGTAG ATGACATGGG CGCAGTAGCC GTCATTGGCT TGTTTTACAC TGAAAACATA
CACCTAACCT CCCTCATGTA TGCGGGCCTG ACGTTAGGCG GCCTGTTCGC GTTAAATGTA
CTCGGTTTTC GTCGGCCTAT TTTTTACCTC GTTGGGGGCA TTCTGCTGTG GTGGTTTGTG
TTGCAATCAG GTGTACATGC AACCGCAGCA GGTATTTTGG CTGCGCTAGC TGTCCCTACA
AAGCCCTACG CGCAAAGTAC TTGGTTTGCT ACTAATATGC GTAGTGTATT AAATCGTTTT
GAGAAAAATG ACCGCAAGGA TAAATCCATT TTAGAGCAGC AAGATCAGCA TGAATTAGTA
GAGCAAGCTC AAGATATTGC CGCCATGACA ACCACACCAA TACAACGCTG GGGGCATGTG
CTAAATCGGC CGGTCAGCTT GATCATTCTG CCCATTTTTG CGTTTATTAA CGCAGGGGTG
GCACTACCTG ATGACCTCAG CAAAATATTC GACTCGGTGG TCTTTATTGG GGTTGCCAGC
GCTATGGTAC TAGGGAAAGT GATTGGCATT AGTGTGTTTG CTTGGATAGC TGTTAAAAGT
GGCTTCTCTC GCTTGCCTAA TGGGTTAGCA TTTGGACATG TTTTCGCACT GGCATGCTTA
GCCGGGGTGG GCTTTACTAT GTCATTATTT ATTGCATCAC TGGGCTTTGC TGGTCATCCT
GAATTATTGG CGCAAGCCAA ATTGGGTATC TTGGCCGGCT CCGTCATAGC GGCCATAATC
GGTACGACTT TATTTCTAAT GATAAAGCAT AAAGTGCACG AAGAGCCTAA AGACGAGCGG
CATAACAAGG CAGGCTTACC GCAGACTGAC CAAGAGTAG
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| Protein sequence | MNQLQDKDRE LAPLERKFNH FICSFEQFFK SQATASITLL LAAIAAMVIA NSQWHEGYEE
ISHMAFSISL GDFAISHSLH TWVNDGLMVL FFFLLGLEIK YECLVGDLKD FRDSSLVIAM
AIGGMLLPAG IYAGVALTGV DEALRGWGIP MATDTAFALG ILALLGSKAP RSAAVTLSAL
AIVDDMGAVA VIGLFYTENI HLTSLMYAGL TLGGLFALNV LGFRRPIFYL VGGILLWWFV
LQSGVHATAA GILAALAVPT KPYAQSTWFA TNMRSVLNRF EKNDRKDKSI LEQQDQHELV
EQAQDIAAMT TTPIQRWGHV LNRPVSLIIL PIFAFINAGV ALPDDLSKIF DSVVFIGVAS
AMVLGKVIGI SVFAWIAVKS GFSRLPNGLA FGHVFALACL AGVGFTMSLF IASLGFAGHP
ELLAQAKLGI LAGSVIAAII GTTLFLMIKH KVHEEPKDER HNKAGLPQTD QE
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