| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4141 |
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| Symbol | |
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| ID | 4175930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4977412 |
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| End bp | 4978374 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057177 |
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| Product | putative ribonuclease BN |
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| Protein accession | YP_663694 |
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| Protein GI | 109900439 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCATTA ATCGTGGAGA AACAGCAACC AGCCCAAGTC AAATTCCATT TTCTGGATGG
TGGGATATTT TACGTCGTAC CGTGAAAAAA ATGCTCGATG ACAACCTATC TTTGATTGCC
GCAGGGGTCG GTTTCTATTT CTTGCTGGCA GTATTTCCAT TATTGGTGGC TTTTATATCG
ATATATGGCT TGCTGGTCTC GCCGGATGAA CTGCAACAGC ATTTGAACCA ACTTATAGGG
GTCGTGCCGG ACCAAGGTCG GCAAATTATT TCGCAGCAAG TTGAACGCAT CATGAGCAAA
TCAAATACTG CATTAAGTAC GGGGGTGGTG TTCAGTACTC TATTTGCGGT GTGGAGTGCG
AGTAAGGGCG CCCAAGCGAT GGTAACCGCA TGCAATATCA CCTATGGGCA GAACCAAAAT
CGTGGCTTTT TAATGATGCT CGTGATGCGT GTATTATTAA CTGCCAGCGC AGTCATGTTA
CTTGTAGCTG CGCTTTTTAC CATTGCGGTC TTGCCCATTT TATTCTCGTA TGTGGGCCTG
CATCATTACG CCAGCATACT GGTGCAGTGG CTAACTTGGC CTTTCTTAGC ACTGGTATTT
AATTTAGCGC TTTCCGCTTT TTATCGCTAT GGCCCTCACC GAAGCACCGC TAAGTGGCGC
TGGGTCACCC CCGGGTCTTT ATTGGCCAGC ACATTGTGGG TTGCCTTTTC ATTCGCGTTT
TCATTCTATC TTGGGCAGTT TGGCCAATAC GACAAAATGT ATGGCTCTCT TGGCAGTGTA
GTGGTCCTGT TAATGTGGTT CTATCTAACG GCCTATATCA TTTTACTGGG GGCAGAGTTT
AATGCTGCCA TGGAGCATCA GACTGAAAAA GACAGTACCC ACGGTCACGA CAAAGCCCAA
GGTAACAGAG GGGCCCATGT CGCGGATACT CGCCCAGATG ATTTAAAAGA AAAAGAAGAT
TAG
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| Protein sequence | MSINRGETAT SPSQIPFSGW WDILRRTVKK MLDDNLSLIA AGVGFYFLLA VFPLLVAFIS
IYGLLVSPDE LQQHLNQLIG VVPDQGRQII SQQVERIMSK SNTALSTGVV FSTLFAVWSA
SKGAQAMVTA CNITYGQNQN RGFLMMLVMR VLLTASAVML LVAALFTIAV LPILFSYVGL
HHYASILVQW LTWPFLALVF NLALSAFYRY GPHRSTAKWR WVTPGSLLAS TLWVAFSFAF
SFYLGQFGQY DKMYGSLGSV VVLLMWFYLT AYIILLGAEF NAAMEHQTEK DSTHGHDKAQ
GNRGAHVADT RPDDLKEKED
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