| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4135 |
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| Symbol | |
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| ID | 4175924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4972388 |
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| End bp | 4973743 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057171 |
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| Product | hypothetical protein |
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| Protein accession | YP_663688 |
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| Protein GI | 109900433 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4325] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.938574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTAC ATATGAACAC ACGGATCATC ACGCTATGGG AAACCATCCG TACCAGCTTT
TGGTTTGTGC CATCAATTAT GGCGCTTATT GCCATTGGCT TATCCCAAGC AGGTCTCGCT
TTCGATCGTT TCGGCGCTGA CAGTGAGCTA GATATACTCG CTGATTTTTA TCAGACCACT
CCCGAATCAG CCCGAGCTTT GTTAACCACC ATAGCTACCG CCATGATAAC GGTCACTAGT
ATTGCGTTTT CCATCACGGT TGTGGCGCTG ACCTTAGCTT CTTCACAGTT CGGCCCTCGG
CTTATTCGTA ATTTTATGAT GGACACGGGT ACCCAATGCG TTTTGGGCTT CTTCCTGTCT
ACGTTTATTT ATTGTTTACT GATTATTCAG GCCACCAAGT CTTTTGAGCA ACAAGAATTC
GTGCCTGGCA TCAGCATTCT TACCTCCGTG TTACTCGCAA TCGTTGGAGT AGGGGTGTTG
ATTTATTTCA TTCATCACGT AGCTAGCGCA ATTCAGGCAG ATAACGTCAT TGATAACGTC
TATCGCGAAC TTAACGACAT TATTGAACGC TTATTCCCGA AAATTGAAGA GCCAGACGAG
GCTGATACGA CTGCAGAACA GCGTGTCGAC TCAGCACCAG AATTCGACCA GATTTACCCT
AATAGCCAAG CTATTGAATC GACGAGCAGC GGATATGTAC AAACCTTGGA CATAGACCAG
CTACGAGCCT TGAGTGAAAA CAGTGATATG GCGCTGAGCG TACATTACAT GCCAGGGGAT
TTTGTAATGC GAGGCTCTGT GATCGCCATC GCTTATTTTA ATGGTGCTAC GCTTTCTTGC
CAACCTAGCA AGATTACCGA ATTAGTGCGT TTAGGCTCTC ATCGCACCCC AGTACAGGAC
GTGGAGTTTG CAATCCGTCA ATTGGTTGAG ATTGCCGTTC GCGCCTTATC ACCTGGCATT
AACGACCCGT ATTCAGCTGT AACCGTGGTA GACAAGCTTA GCGCTGTGCT GTGCACACTC
ACCGACAAAC CCTTTCCGCC AACTATCTAC GAAGACGACC ACGGCATAAC TCGACTTCAA
TGCAAGCCCG TGGCTTTCAC TGGGTTGGGT GAAGCGGCGT TTAATCAGAT CCGCCAATAT
TCGAAAGACA GCCTAGCGGT CACCATTCGT TTATTGGAAG GCTTAAGCAG TATTTTGCGT
TTTAGCCGTA GCCCCGAGCA TAAACAGTTC GTTCGCCAAC AGGCCGCTAT GATTGAACAA
ATACAGAGCA GCTCACAACT AGCTGAGCAT GACTGGTTGG ATATAAAGCG CCGCCTAGAT
GATATAAAGC GCCACCTAGA CAGTGACAGC AGCTAA
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| Protein sequence | MSVHMNTRII TLWETIRTSF WFVPSIMALI AIGLSQAGLA FDRFGADSEL DILADFYQTT
PESARALLTT IATAMITVTS IAFSITVVAL TLASSQFGPR LIRNFMMDTG TQCVLGFFLS
TFIYCLLIIQ ATKSFEQQEF VPGISILTSV LLAIVGVGVL IYFIHHVASA IQADNVIDNV
YRELNDIIER LFPKIEEPDE ADTTAEQRVD SAPEFDQIYP NSQAIESTSS GYVQTLDIDQ
LRALSENSDM ALSVHYMPGD FVMRGSVIAI AYFNGATLSC QPSKITELVR LGSHRTPVQD
VEFAIRQLVE IAVRALSPGI NDPYSAVTVV DKLSAVLCTL TDKPFPPTIY EDDHGITRLQ
CKPVAFTGLG EAAFNQIRQY SKDSLAVTIR LLEGLSSILR FSRSPEHKQF VRQQAAMIEQ
IQSSSQLAEH DWLDIKRRLD DIKRHLDSDS S
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