Gene Patl_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4123 
Symbol 
ID4175912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4957892 
End bp4958506 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content46% 
IMG OID638057159 
ProductTetR family transcriptional regulator 
Protein accessionYP_663676 
Protein GI109900421 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCTG TTAGTTGTAC CGCCACTGTA GGAAGACCTA GAGCTTTTGA CATGCAGGCC 
GCGCTTGAAA AAGCGTTAGA CGTATTTTGG ACCAAAGGAT ATGACGGTGC CTCTCTGTCT 
GATTTAACCA GCGCTATGGG GATCAACAAA CCCAGTTTGT ATTCTGCCTT CGGCAATAAA 
GAACAGCTAT TTTTAAAGGC TATCGAATTT TATGAAAGCC GCCCTTGTGG TTTTTTCAAA 
CCCGCTTTAG AGCAAGCTAC AGCCTATGAC GTCGCTAAGT TTATGTTGCT AGGTGCAGCG 
CAAAGTATGT CTGATACATC TCATCCACAG GGTTGTGTCA TGGTACAAGG CGCTTTGGCA 
TGCAGTGAAG CGGCAGCAGG CGTCAAGGAA GTACTCATTA GCCGCCGTCA ACAAAGTGAA 
TCAGAAGTAC GTGACCGTTT CGAATTGGCC AAAAACCAAG GTGACTTATC AAAGGATGAA 
GATTCAGAAG CATTGGCTCG TTATTTATGT ACCGTCATTA ATGGCATTGC TATTCAGGCA 
AGCAGCGGGG CAACTGAAGA GCAATTAGTG GAAGTCGCTC ACATGGCGTT AAAGAGTTTC 
CCGCGCAATT CTTAG
 
Protein sequence
MSAVSCTATV GRPRAFDMQA ALEKALDVFW TKGYDGASLS DLTSAMGINK PSLYSAFGNK 
EQLFLKAIEF YESRPCGFFK PALEQATAYD VAKFMLLGAA QSMSDTSHPQ GCVMVQGALA 
CSEAAAGVKE VLISRRQQSE SEVRDRFELA KNQGDLSKDE DSEALARYLC TVINGIAIQA 
SSGATEEQLV EVAHMALKSF PRNS