| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4118 |
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| Symbol | |
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| ID | 4175907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4952445 |
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| End bp | 4953275 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057154 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_663671 |
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| Protein GI | 109900416 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.402616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTA ACAGCAGCGG AAAATCAAAA TTTATTTATA CCCTACTTGC GTGGACGATA
AGCGCAGCGA TCTTCTTTCC GATTTTCTGG ACACTATTAA CCAGCTTTAA AACGGAAGCA
GAGGCCATAT CGGCTAACCC TAGTTTGTTT ATGTTCGACT GGACGCTCGA AAATTACGAG
GATGTGTTGG CACGCTCTCC CTATTTCGAT CACTTCTGGA ATTCAGTGGT TATCTCAGTA
GGTTCAAGCT TAATCGGCTT GCTGATCGCC ATCCCTGCGG CGTGGTCTAT GGCATTTGTA
CAATCTAAGC GCACCAAGAA TCTATTAATG TGGATGCTCT CAACCAAAAT GCTGCCCCCT
GTAGGTGTGT TGATCCCGAT TTATTTGTTG TTCCGTGATT TCGACTTACT GGACACCAAA
TTGGGCTTGG TCATTGTGAT GACCCTGATC AACCTACCGA TTATGGTATG GATGCTTTAT
ACCTATTTTC GTGAAATTCC AAACGAAATA CTCGAAGCAT CACGTATGGA CGGCGCCAGT
ATTAGTGCAG AAATATTCCA CGTATTGCTG CCTATCGCAC TGCCGGGAAT TGCATCAACG
TTACTACTTA ACGTGATCCT TGCGTGGAAC GAAGCATTCT GGACACTGAT TTTAACCGCA
GCAAACGCAG CGCCACTCAC CGCGTTTATT GCCAGCTACT CGAGCCCAGA GGGCTTATTT
TACGCCAAAC TATCAGCGGC CTCAGCGATG GCAATCGCAC CGATATTGAT ACTTGGTTGG
TTTAGCCAAA AACAACTCGT ACGCGGATTA ACCTTCGGCG CGGTGAAATA G
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| Protein sequence | MAINSSGKSK FIYTLLAWTI SAAIFFPIFW TLLTSFKTEA EAISANPSLF MFDWTLENYE
DVLARSPYFD HFWNSVVISV GSSLIGLLIA IPAAWSMAFV QSKRTKNLLM WMLSTKMLPP
VGVLIPIYLL FRDFDLLDTK LGLVIVMTLI NLPIMVWMLY TYFREIPNEI LEASRMDGAS
ISAEIFHVLL PIALPGIAST LLLNVILAWN EAFWTLILTA ANAAPLTAFI ASYSSPEGLF
YAKLSAASAM AIAPILILGW FSQKQLVRGL TFGAVK
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