Gene Patl_4113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4113 
Symbol 
ID4175902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4945498 
End bp4945914 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content45% 
IMG OID638057149 
Producthypothetical protein 
Protein accessionYP_663666 
Protein GI109900411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.306478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGCCC TCTTTTTATC TGTCATTCTA ACGCTTATCT TTGGCTTTCC CGCCAGAGCT 
AATTACTCGA TCGTAGTGGT TGCCAATACG GAAAATAAGG ATATTCAACT GAATCGCCAA
CAAGTCCGTA ACTTATTCAT GGGCGGTGCA TTGCCTCATA ATTTTGAGGC GATCGCATTA
CCACCAGAAA ATCAAACACG TGTGTTATTC AATACCAGAG TGGTTGGCTT AACTGAGTCT
CGAATTCAGT CTTACTGGGC TCAGATGCGA TTTACTGGGC GTAAAAAAGC CCCTAAAGAA
GTTGCCTCTG AAAAAGCGGT CTTGGAGTAC ATCAAAAGTC ACCCAGGCGC CGTTGGGTAC
TTACCAGCGG GAGTGTCTAT ACCTGACGAA CTAACCGTAC TTTACAGCGC ACATTAA
 
Protein sequence
MRALFLSVIL TLIFGFPARA NYSIVVVANT ENKDIQLNRQ QVRNLFMGGA LPHNFEAIAL 
PPENQTRVLF NTRVVGLTES RIQSYWAQMR FTGRKKAPKE VASEKAVLEY IKSHPGAVGY
LPAGVSIPDE LTVLYSAH