Gene Patl_4107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4107 
Symbol 
ID4175896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4940073 
End bp4940492 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content45% 
IMG OID638057143 
Producthypothetical protein 
Protein accessionYP_663660 
Protein GI109900405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAT TCCTCGCTCT ATTTGTCACA TGCTGGCTGG TGCTAACCCC CTCATTGAAG 
GCCGCTGAAG CGATTATTGT GGTGGCCAAT ACCTCAGATA AGTCCTTGCA GCTGAATCGT
CTACAAGTAC GCAACCTTTT TATGGGTGGC GCTTTACCTT ATGACTTAGA TGCCATCGCT
TTGCCGCCGG AAAACCAAAC GCGCGTTTTG TTTAATACCA AGGTGGTAGG CCTTACAGAA
TCACGTATTC AATCCTATTG GGCACAAATG CGCTTTACCG GACGTAAAAA AGCACCAAGA
GAATTTAGCA ACGAGCAGTC AATGTTAGAA TATCTAATCA ATAATGCTGG TGCTGTAGGC
TATTTGCCTG AAGGAATATC AGTGCCTAAT GAGTTGACCG TTTTGTACAC GGTTCGGTAA
 
Protein sequence
MRKFLALFVT CWLVLTPSLK AAEAIIVVAN TSDKSLQLNR LQVRNLFMGG ALPYDLDAIA 
LPPENQTRVL FNTKVVGLTE SRIQSYWAQM RFTGRKKAPR EFSNEQSMLE YLINNAGAVG
YLPEGISVPN ELTVLYTVR