Gene Patl_4105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4105 
Symbol 
ID4175894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4937651 
End bp4938391 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content49% 
IMG OID638057141 
Producthypothetical protein 
Protein accessionYP_663658 
Protein GI109900403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCC CCTTGCTAAG CCTCTTGCTC ATTGTGTTGG CCGGCTTTAC TTCGTTTTTG 
ACCGCCGCGA TGGGAGCAGG TGGTGGGCTA TTGCTGCTGG TGGCTATGGC GTCTTTTATG 
CCAATGGCTG CGGTTATTCC GGTTCATGGG CTGGTGCAAC TTGGCTCGAA CGCCAATCGC 
ATGTTGCTTA CCTACCGTTT TATTGACATC AATATGCTGA AGTACTTTGC TGCAGGTGGG 
CTTTTGGGCG CATTGATGGC GTCATTTGTG GTCAGTGATT TACCGCTCGA TTGGATGAAG 
TTAGTCGTAG GCGTGTTCGT GCTATTTCTA TTGTGGGGCA AAAAGCCCAG CATTAAAGAG 
TCCAGCCCAT TTGGCAAAGC AATGGCCGGG CTTATCACTA CGTTTTTATC CATGTTTGTA 
GGCGCAAGTG GGCCATTAGT CGGCAGCTAT CTGCATACCA AGGGCTACGA CAAAATGCGT 
TTTACGGCCA CGTTCTCATC CAGCATGACC ATGCAACACA CCCTAAAAGC ACTCGTTTAC 
GGTGTGGCAG GCTTCGCATT TTGGCAATGG TTGCCCTTGG TTGTTGCTAT GATCGCCGCA 
GGTGCTGTAG GCACATGGTT GGGCCTAAAA TTGCTACACA AAATACCCGC CGCGAAGTTT 
CAGCGCTTAG TGCAAATTGT GTTATCTGTG TTGTCCATAA ATCTGATGTG GCAAGCGGTA 
CAGGTATTGT TTTTATCATA G
 
Protein sequence
MITPLLSLLL IVLAGFTSFL TAAMGAGGGL LLLVAMASFM PMAAVIPVHG LVQLGSNANR 
MLLTYRFIDI NMLKYFAAGG LLGALMASFV VSDLPLDWMK LVVGVFVLFL LWGKKPSIKE 
SSPFGKAMAG LITTFLSMFV GASGPLVGSY LHTKGYDKMR FTATFSSSMT MQHTLKALVY 
GVAGFAFWQW LPLVVAMIAA GAVGTWLGLK LLHKIPAAKF QRLVQIVLSV LSINLMWQAV 
QVLFLS