| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4081 |
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| Symbol | |
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| ID | 4175870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4906352 |
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| End bp | 4907272 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057117 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_663634 |
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| Protein GI | 109900379 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATA AAGCGGTGAA ATCGGGCGTC TTATTTGCGA TAGCGGCATA TACCATGTGG
GGAATTGCCC CAATGTATTT CAAGTTGCTA GGCCAAGTGC CAGCGATGGA AATATTGATG
CATCGCATTA TCTGGTCGGT GATTGTACTC ACGTTGCTTG TAGTCGTTAC CGGCAAAGCG
GACAAAGTCA AGCAGGCGAT CCTTAACCCT AAGGTGATGC AGGTCCTCTT AATTTCAGGG
GTATTACTGG CCGCCAACTG GTTTATCTTT ATCTGGGCGA TTAACAATAA CCACCTGCTT
GATGCCAGTT TAGGCTATTA CATCAACCCA TTGTTGAACG TGTTTCTTGG TCGCTTGTTT
TTGGGCGAAC GCTTGCGCCG TTTGCAAAAA GTCGCGGTTG GATTAGCGCT CTCAGGTGTG
GTGTATTTTA TCATCGGTTA CGGCCAGTTA CCTTGGGTGG CTCTTGCACT CGCTGGCACA
TTTGGTATTT ATGGTTTATT GCGCAAACAG GTCGCGGTGG ATTCATTGCC AGGCTTGCTT
ATTGAAAGTG TATTTTTACT GCTTCCTGCG ATTGCGTATT GGATTTGGTT CGCCGGTGAA
TACAGCAACA TGGTGACCAA TGACATGGCA CTCAACATTA CCCTGATTTG CGCCGGTATC
GTGACCACAG CGCCTTTATT ATGTTTTACC GCAGCGGCTA AACGCATCAT GTTTTCGACA
TTAGGCTTTT TTCAATATAT TGGCCCAAGT TTGATGTTTG TATTGGCGGC GGTGGTCTAC
GGTGAGCCGT TAGATGACAA CAAAATAGTG ATGTTTGCTT TTGTTTGGTT GGCACTGGGT
TTGTTTAGTT ATGATTCACT GCGCCAGTAT CGTAAGGTCA GAAAAGCGTT AAAGCAGCCT
AACACCAATG CCAATAAATG A
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| Protein sequence | MNDKAVKSGV LFAIAAYTMW GIAPMYFKLL GQVPAMEILM HRIIWSVIVL TLLVVVTGKA
DKVKQAILNP KVMQVLLISG VLLAANWFIF IWAINNNHLL DASLGYYINP LLNVFLGRLF
LGERLRRLQK VAVGLALSGV VYFIIGYGQL PWVALALAGT FGIYGLLRKQ VAVDSLPGLL
IESVFLLLPA IAYWIWFAGE YSNMVTNDMA LNITLICAGI VTTAPLLCFT AAAKRIMFST
LGFFQYIGPS LMFVLAAVVY GEPLDDNKIV MFAFVWLALG LFSYDSLRQY RKVRKALKQP
NTNANK
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