Gene Patl_4075 details

Gene Information

• Locus tag: Patl_4075
• ID: 4175864
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 4899413
• End bp: 4900111
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638057111
• Product: hypothetical protein
• Protein accession: YP_663628
• Protein GI: 109900373
• COG category: [S] Function unknown
• COG ID: [COG3159] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAAG CATCTGGTCA GCAAAAAAGT CCATTAGACG ACACCTCTTC CTTTGCTGAA 
CCGGATGGGT TAACTGAACA GCAGGTGGCT ATCTATCTTG CCAAGCACCC TGAGTTCTTC 
GTTAAACACC CAGCGTTACT TGAGCAACTG CAATTGCCCC ATGCCCAAAA AGGCAGTGTC 
TCTCTGGTCG AGCGCCAAAG TGAACAGCTA CGCCAAAAAG TACGCTTACT CAATTCCAAA 
CTGACTCAGC TGATCAGCAT CGCTAAACAA AACGAAGCCA TATACCGTAT TTATGCAGAT 
CTAAACCTAC GCGTATTGAA ATGCTCTGAC ATAAGTTCAG TGCAATATGT GCTCGAAGAC 
GTGATGCAAG AGCAGTTAAA CCTTTCATCT GTCGCTTTGA AACCTTACAA GGGTGCCTTT 
GCATTACCAG AAATTCAGCG CAAATTGTTT GCCGAAAAGC GCTTTAAAGA CGAGGCGTTT 
TTCTTCGGCC GCTTGAGCGA ACACGAAAAA AAGCTGTTAT TTAATGACCA ACAAGCTGAA 
TCTGTTGCCT TATTGCGCTT AGGTGATAAT GGCGAGCTGG GTATTTTAGC CATTGGCAGC 
AACGATCCTG GGCACTTTAA CCCTGACATG GACACCTTGC TTATCACTCA GTTACAACAG 
TTTTTAAGCA TTCTACTGCC TAAATTACTG GCTTACTGA 

 

Protein sequence

MNEASGQQKS PLDDTSSFAE PDGLTEQQVA IYLAKHPEFF VKHPALLEQL QLPHAQKGSV 
SLVERQSEQL RQKVRLLNSK LTQLISIAKQ NEAIYRIYAD LNLRVLKCSD ISSVQYVLED 
VMQEQLNLSS VALKPYKGAF ALPEIQRKLF AEKRFKDEAF FFGRLSEHEK KLLFNDQQAE 
SVALLRLGDN GELGILAIGS NDPGHFNPDM DTLLITQLQQ FLSILLPKLL AY