| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4068 |
|---|
| Symbol | |
|---|
| ID | 4175857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 4892691 |
|---|
| End bp | 4893491 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638057104 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_663621 |
|---|
| Protein GI | 109900366 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCCCCA CAGCTGGCCA ATCAAGACTG CATCGACCGT ATTATCGCAA TGGTGATGAA
CATCGAGGCG GCGCCGACGT CAGCTTCCAA GACATCGTAA AAATCTTCGG TTTTCGCACC
GTAAATATTG GCAAATGGGT CACCCCGGAA GAACAGCAAA TCGCCGCTAA CCTATTTTTT
GATGCCTTTT GCGACTTAAT GGATATTTTG CAGGTGCCAG AGTCGGTTAT TTCATTAAAT
GGCACCTTGT CATTAGCGTT TGGTACGGGC GGGCGAAAAC ACAGTTGCGC CCATTATGAG
TCCCAAACTA AACGCCTTGC ATTAGCCAAA AATGCAGGTG GCGGGTCCTT GGCTCACGAA
TGGTTTCACG CCTTCGACCA TTATATTTGC GACAAACTTT TTGTTGTTTG TCAGCCGCAT
AATTTCGCCT CAGAACTGTG GTTAGATGAT CATGAGATGC ATCCCCACCC GCTTAACAAA
AAGCTGAGCC TGTGCTTCGA GAGTATTTTT TTATCGCCTG ATAAAGAAGA GCCTAATCAA
TATGTATTGG CCAGCGCCCT AGTGGATAAA GAAATGAAAT TGTATTATTT CGCTCGCCCT
CAAGAATTAG CGGCGCGAGC ATTTGAAGCG ATCATCCAAG ATCATGGCAT ACGTAACGCA
TTCCTAGTGC AAGGCACCAA GAAGAGTCCA GAAGCACTGT TAGGGGTGTA CCCTAAGGAC
CAACATCGTC AAAACGTGCA GGATCATTTC TTAGATTACT TTGTTTATCT CGGTCAAGCG
CTAGAGAATA AAAGTACTTA G
|
|---|
| Protein sequence | MIPTAGQSRL HRPYYRNGDE HRGGADVSFQ DIVKIFGFRT VNIGKWVTPE EQQIAANLFF
DAFCDLMDIL QVPESVISLN GTLSLAFGTG GRKHSCAHYE SQTKRLALAK NAGGGSLAHE
WFHAFDHYIC DKLFVVCQPH NFASELWLDD HEMHPHPLNK KLSLCFESIF LSPDKEEPNQ
YVLASALVDK EMKLYYFARP QELAARAFEA IIQDHGIRNA FLVQGTKKSP EALLGVYPKD
QHRQNVQDHF LDYFVYLGQA LENKST
|
|---|
| |