Gene Patl_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4062 
Symbol 
ID4175851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4885681 
End bp4886106 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content43% 
IMG OID638057098 
Productputative thiol-disulphide oxidoreductase DCC 
Protein accessionYP_663615 
Protein GI109900360 
COG category[S] Function unknown 
COG ID[COG3011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0170887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTC GTATTTTCTA TGATGGCTTT TGTCCTTTGT GCTTAGCCGA AATGAATAAG 
CTAAAAGCTT ATGACGAAGG GCATAATATT CAGTTTGTAG ACATACAGAT GGCGAGTTTT
TCCAAGGACT ATCCAAACGT AAACTGGCAT GATTTGAATG CGCGTATTCA TGTACAAAAA
ATGAATGGCG AAATGGTGAC AGGACTAGAT GCAACTTATC TGGCATGGGA TACGATTGGC
AAAGGTTGGT TGTATGGCTG GATGCGCTGG CCGATTATTC GCTGGTTTGC TGATGGGTTC
TACGCATTCT TTGCCCGTCA TCGGTACACT ATCTCCTATC TGCTTACCGG TAAGAAGCGG
TGCGAGACCT GTACTGTTCC GGAAACTATG AGAGACGATT TAAAGGGTAA AGGCGAAGAT
AAATGA
 
Protein sequence
MAIRIFYDGF CPLCLAEMNK LKAYDEGHNI QFVDIQMASF SKDYPNVNWH DLNARIHVQK 
MNGEMVTGLD ATYLAWDTIG KGWLYGWMRW PIIRWFADGF YAFFARHRYT ISYLLTGKKR
CETCTVPETM RDDLKGKGED K