| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4060 |
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| Symbol | |
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| ID | 4175849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4883361 |
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| End bp | 4884782 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638057096 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_663613 |
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| Protein GI | 109900358 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCAC CTCGCGAACA GTTTGGCTCT CGTTTAGGTT TTATTCTCGC GGCTGCAGGC
TCTGCAGTTG GTATCGGAAA TATGGTTGGT TTTCCGGTTG CGGCAACAAA AAACGGTGGT
GGTGCTTTTT TGCTAATGTA CGCCATTTTC GTCGCATTTA TTTGTTTACC TGTGATGTTA
GCCGAGATGT CGGTAGGCCG AGCTAGCCGT AAAGATCCGC TTGGGGCATA CAATGTATTA
TCGGGCGGAC AGCGTCACTG GAAGATAGCA GGCTGGCTAG CCACGATTAC TCCTTTTATG
ATTGCCATAT TCTACTTGGT ACTCACGGTG TGGATTTTCG GCTATTTGGT GCAGTGTCTA
TTGGGTAACC TTGATGTATT GGCTGACCCT AGCACCTTCG GGGTATTCAT TAACGGCTAC
GAGCTGTTTT ACTACATGAT CGGTGTGCTG ATTATTGTGT ACATGATCTT ACAGGGTGGG
GTGAAACAGG GCATTGAGAA AGCCGCTAAG TTAATGATGC CGACTTTGTT TGTGATGCTA
ATTGGCTTGG TAATCTTTGT TTTAACCCTA GACAACGCAT TTGAGGGAGT GAAGTACTAC
CTTATCCCTG ACTTCAACAA AATTGATGCT GCTGTGGTCA GTGCTGCTTT ATCTCAAGCG
TTCTTTTCGC TATCGCTGGG GATGGGAATA ATGCTGACGT ACGGCTCATA TCTTGATAAA
CACGCCGACG TGCCGGGCTC TGCAAAGCTT GTTGCTTTAA TGGATACGGC AGTGGCGTTT
ATTGCTGGTT TATTGATTTT ACCGGCTGTG TTTTCATTTA ATCCCAATAC CGATACACAA
AGTTTAAGCG ATTCATCCGT GGGCATGATT TTTACTTTCC TACCGAAAAT CTTCTTGGCC
TTACAAGGCA CTATTGGCTA CGCAGGCGCG AGTATTGTCG CTAGCTTGTT TTTCTTGTTA
GTGTTTTTTG CTGCAATTAC GTCTTTGGTC TCTATTTTTG AAGTGCCGGT TTCAGCCTTG
ATGGAAGATA AAGGCTATAG CCGTAAAAAG TCACTGGCGA TCTTAGGCGG ATTACTTGTG
GTGATGTCGA TTGCAGCCGC CACTTCTTTC GGTATTTCTA CTTTCTTCAC AGAGTTTCTG
ACCTACGCAG GCCAAACTAA ATCTGTGTTT GATGTGATCA TTGATGTGTT CTACGACACG
ATATTGCCGT TTAATGGTCT GTTAGTGTGC CTGTTTGTAA TTTACCGCTG GAAGAAAAGT
AACTTGAACA CTGAGTTAGA TTTAGGTGCG CCACAATTCG CCAATAGCTG GTTCGAAAAA
TACGTTAACT TTTCTTTGGG TACCTTTATT CCGGTTATTT TACTCTTGGT CTTTATTAAT
ACCGTGGCGC TTAAGTATTT TGGCAATGCG TTAATCGGTT AA
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| Protein sequence | MGAPREQFGS RLGFILAAAG SAVGIGNMVG FPVAATKNGG GAFLLMYAIF VAFICLPVML
AEMSVGRASR KDPLGAYNVL SGGQRHWKIA GWLATITPFM IAIFYLVLTV WIFGYLVQCL
LGNLDVLADP STFGVFINGY ELFYYMIGVL IIVYMILQGG VKQGIEKAAK LMMPTLFVML
IGLVIFVLTL DNAFEGVKYY LIPDFNKIDA AVVSAALSQA FFSLSLGMGI MLTYGSYLDK
HADVPGSAKL VALMDTAVAF IAGLLILPAV FSFNPNTDTQ SLSDSSVGMI FTFLPKIFLA
LQGTIGYAGA SIVASLFFLL VFFAAITSLV SIFEVPVSAL MEDKGYSRKK SLAILGGLLV
VMSIAAATSF GISTFFTEFL TYAGQTKSVF DVIIDVFYDT ILPFNGLLVC LFVIYRWKKS
NLNTELDLGA PQFANSWFEK YVNFSLGTFI PVILLLVFIN TVALKYFGNA LIG
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