| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4057 |
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| Symbol | |
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| ID | 4175846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4879789 |
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| End bp | 4881033 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638057093 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_663610 |
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| Protein GI | 109900355 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGAGAA GCGCGCAATT AAGTGAATAC ATCATTCAAG GTTATCAATA TCTTGGCCTC
TCTGTGAAAA ACGATGGTGC GATATTTGCG ATTACCGCAG TCACACTGTT GATGTGCTTA
GCTTGGCTCA GTTTCAGATT AGTACGTATA GCCTTAACAG GCCGGTTAAC GCGCTTGGTT
TTTAACAGCA AAAATACTAT TGACGATGAG CTTCACGAAC ACGGTGTGTT CAGACGTATC
GCCCATATCG TCCCAGCCAT GGTGATTTAC TTATGCAGCA GCATGTTGGT AGAGGATCCC
ATTCTGTTTT CTGCGTTACA AAAAATCGCT ATTATTTATA TGCTTATTGC AGCCGTAGCG
GCGAGCAGTG CATTACTTAA CACAGTTGAA GACATCTACA ACGCCTCTGA ATTAGCAAAG
CGAGCTCCTG TTACCGGTTT TATTCAGGTA GGTAAGTTGT TCGTGGTTAT TGTTGCCGGT
TTGCTTATTA TCTCTAACTT GCTGGATAAG TCACCGCTAT TACTGCTTTC CGGTTTAGGT
GCTGTCACCG CGATCCTGTT GCTGTTATTT AAAGACACCA TTTTAGGCTT TGTAGCGGGT
ATTCAGATTG CGGCCAACCG CATGGTAAAT AACGGAGACT GGGTAGAACT GCCTAAATAT
GGTGCTGACG GAACGGTTTT ACAGGTCGGC CTTACTACAG TAAAGGTACA AAACTGGGAC
AAGACGATTT CCACCGTCCC GACTTACAGT TTGATAACAG ATTCAATGAA GAACTGGCGC
GGCATGTCAG AGTCTGCAGG TCGCAGGATC AAACGCTCCA TATACATAGA CGTAAACAGC
ATTAAATTTT GCGATCAAGA AATGCTCGAC GACTTCCGTA AAATTCGCTA CATCAATCAG
TATATAGAAA AGAAACGTGC CGAATTAGAC GCCTATAATC AAGAGCAAAA AATTGATATT
CAAGACTTAC TAAACAGCCG CCGTTTAACC AACATAGGTA CCTTGCGCGC TTATTTGGTT
TCCTACTTAC GCCATCACCC TAGCGTTAAT CAGGATATGA CATTAATGGT GCGTCAATTG
CCGCCCACTG AATTAGGCTT ACCATTAGAG ATATATTGCT TTAGCGCTAA CAAAGATTGG
ATAGCCTACG AAGGTATTCA AGGGGATATA TTTGATCATG CCCTGGCGAT GCTGCCAGTC
TTTGGATTAA GAGCCTATCA GCGTATAAGT GATAGGCCTC ACTAA
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| Protein sequence | MERSAQLSEY IIQGYQYLGL SVKNDGAIFA ITAVTLLMCL AWLSFRLVRI ALTGRLTRLV
FNSKNTIDDE LHEHGVFRRI AHIVPAMVIY LCSSMLVEDP ILFSALQKIA IIYMLIAAVA
ASSALLNTVE DIYNASELAK RAPVTGFIQV GKLFVVIVAG LLIISNLLDK SPLLLLSGLG
AVTAILLLLF KDTILGFVAG IQIAANRMVN NGDWVELPKY GADGTVLQVG LTTVKVQNWD
KTISTVPTYS LITDSMKNWR GMSESAGRRI KRSIYIDVNS IKFCDQEMLD DFRKIRYINQ
YIEKKRAELD AYNQEQKIDI QDLLNSRRLT NIGTLRAYLV SYLRHHPSVN QDMTLMVRQL
PPTELGLPLE IYCFSANKDW IAYEGIQGDI FDHALAMLPV FGLRAYQRIS DRPH
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