| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4054 |
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| Symbol | |
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| ID | 4175843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4877298 |
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| End bp | 4877873 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057090 |
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| Product | HNH endonuclease |
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| Protein accession | YP_663607 |
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| Protein GI | 109900352 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1403] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000779297 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGGTAT TAAGATTGAA CAAATCTGGC CTACCTCAGG CATGGATCAC TTTAGAAGAA
GCGGCTAAGT ACTATACCCA AGATCGCGTT TTATTTGAGT TAGGTGACAG CAAGCGAGTG
CTGCGCGGTG GCTGGAATAA GCATGGCCTG CAGAGCCGCT TAACCTTGTC TTCAATTATT
GGCTGCGACG GAAAAGTCAC CCCTCCTTCC GGTAAGGTAC CCCTAAATAA TCGCTACTTA
TTTCGCAGAG ACAATAACTT GTGCATGTAC TGCGGACAAA AATTTCGTAT ACCTGAACTC
ACCCGTGATC ACATTATTCC GCGCTCAAAA GGCGGTCGTG ACATTTGGAC CAATTGCGCT
TCAGCCTGTA ATCGCTGTAA TTGTTTCAAG GCGGATCGTA CCCCAGAAGA AGCCGGGCTT
TCTCTTATCG CCGTGCCCTT TACACCAAAT ATATATGAGC GATTCTACCT GATGAACCGA
CGTATTCTGA CCGACCAAAT GGCTTTTCTA GGCAGTCACT TTTCAAAAAA CCGTGCTTGG
GAAACGACAG ATAACAGCGA AATAGCGCTT ATTTAG
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| Protein sequence | MLVLRLNKSG LPQAWITLEE AAKYYTQDRV LFELGDSKRV LRGGWNKHGL QSRLTLSSII
GCDGKVTPPS GKVPLNNRYL FRRDNNLCMY CGQKFRIPEL TRDHIIPRSK GGRDIWTNCA
SACNRCNCFK ADRTPEEAGL SLIAVPFTPN IYERFYLMNR RILTDQMAFL GSHFSKNRAW
ETTDNSEIAL I
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