| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4038 |
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| Symbol | |
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| ID | 4175827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4862075 |
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| End bp | 4863784 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057074 |
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| Product | sulfite reductase subunit beta |
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| Protein accession | YP_663591 |
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| Protein GI | 109900336 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02041] sulfite reductase (NADPH) hemoprotein, beta-component |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAG ACAATAAATT CGTTGTAGAG GGCAAGCTTG CCGACAACGA ACGCCTTAAA
GGCGAAAGCA ATTTTTTACG TGGCACTATT GCTGAAGATT TAAAAGATGA TTTAACCGGT
GCATTTGTGG GTGACAATTT CCAGTTAATT CGTTTTCACG GTATGTATCA ACAAGACGAT
CGTGACTTGC GCGCCGAACG CGCTAAGCAA AAGCTTGAGC CATTACAAAA TGTCATGTTA
CGTGCGCGTT TGCCAGGAGG CATTATTAAG CCTCAGCAAT GGTTAGCAAT TGATAAATTC
GCCGAAGAAA AATCACTCTA CGGCAGTATT CGTTTAACGA CGCGCCAAAC ATTTCAATTT
CACGGTGTAC TTAAACCCAA TATCAAATTG ATGCATCAAA CGCTTAACCA AGTCGGTATT
GATTCAATTG CCACTGCTGG TGATGTTAAT CGAAATGTGT TGTGTACCTC GAATCCTATT
GAGTCGGCAG TGCATCAAGA AGCCTATGAA TGGGCCACTA AAATCAGTGA ACATTTACTG
CCTAAAACGC GTGCTTACGC GGAAATATGG CTTGATGGCG AGAAAAAAGA AACCACAGAT
CATGAACCGA TTTTGGGCGC CAACTACTTG CCGCGTAAAT TTAAGACAAC GGTGGCCATT
CCTCCTTTAA ACGATGTGGA TGTGCACGCT AACGATCTTA ACTTTATTGC CATTTCTAAA
GACGGAAAGT TAGTCGGGTT TAATGTGTTA GTCGGTGGTG GTCTTGCTAT GACCCACGGC
GACCACGCTA CATTCCCCCG TAAGGCAAGC GACTTTGGTT TTATTAAAGT GGAAGACACC
TTAGCGATTG CTGAAGCCGT TGTCAGCACG CAGCGTGACT GGGGTAACCG AGTTAACCGT
AAAAACGCAA AAACCAAATA TACCCTTGAA CGAGTAGGGG TAGAAAACTT TAAAGCCGAA
GTCGAAAAGC GTTCAGGCGT AACGTTTGGT GAAAGTCAGG CATATGAGTT TACTGAGCGT
GGAGACCGCA TTGGTTGGGT TGAAGGTATT GACGGTAAGC ATCATTTGAC CCTATTTATT
GAAAATGGCC GAATTTTAGA TTACCCAGGT AAGCCTTTGA AAACAGGCTG TGCTGAAATC
GCCAAGATAC ACGACGGTGA TTTCCGTTTA ACCGCTAATC AAAACCTAAT TGTGGCGGGC
GTCAGCGAAC AAAATAAAGC GAAAGTGGAA GAAATAGCCA GAGCTCATGG TTTGATCGAA
GATGACTTGT CAGCTCAGCG CAAAGATTCC ATGGCTTGCG TTGCTTTGCC TACTTGTCCT
TTGGCAATGG CAGAGGCTGA GCGCTATTTG CCTGAAGCCG TTACTCAGTT AGAGGGCATA
TTAGCGAAAC ACGCAATTGC GCAAAAGAGC ATAATTTACC GTGTTACTGG CTGCCCGAAT
GGTTGTGGAC GTTCCATGCT GGCTGAAATC GGTTTAGTGG GTAAAGGGCC GGGCAAATAC
AATTTGCACT TAGGCGGAAA CCGTCAGGGC ACACGAATTC CGAAAATGTA CAAAGAGAAC
ATCGGTGAGC AGCAAATCAT GGACGAGCTA GATGTATTGA TCGGCCAGTG GGCAAAAGAA
GCTCAAAGTG ATGAATCATT TGGTGACTTT GTTATTCGCA CAGGTGTTAT CGCAGAAGTG
GTGAATTCCG CTGAGGATTT TTATGCGTAA
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| Protein sequence | MTTDNKFVVE GKLADNERLK GESNFLRGTI AEDLKDDLTG AFVGDNFQLI RFHGMYQQDD
RDLRAERAKQ KLEPLQNVML RARLPGGIIK PQQWLAIDKF AEEKSLYGSI RLTTRQTFQF
HGVLKPNIKL MHQTLNQVGI DSIATAGDVN RNVLCTSNPI ESAVHQEAYE WATKISEHLL
PKTRAYAEIW LDGEKKETTD HEPILGANYL PRKFKTTVAI PPLNDVDVHA NDLNFIAISK
DGKLVGFNVL VGGGLAMTHG DHATFPRKAS DFGFIKVEDT LAIAEAVVST QRDWGNRVNR
KNAKTKYTLE RVGVENFKAE VEKRSGVTFG ESQAYEFTER GDRIGWVEGI DGKHHLTLFI
ENGRILDYPG KPLKTGCAEI AKIHDGDFRL TANQNLIVAG VSEQNKAKVE EIARAHGLIE
DDLSAQRKDS MACVALPTCP LAMAEAERYL PEAVTQLEGI LAKHAIAQKS IIYRVTGCPN
GCGRSMLAEI GLVGKGPGKY NLHLGGNRQG TRIPKMYKEN IGEQQIMDEL DVLIGQWAKE
AQSDESFGDF VIRTGVIAEV VNSAEDFYA
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