| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4027 |
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| Symbol | |
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| ID | 4175816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4850510 |
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| End bp | 4851241 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638057063 |
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| Product | putative methyltransferase |
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| Protein accession | YP_663580 |
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| Protein GI | 109900325 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR00740] methyltransferase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCAA GCAAAGACGC CATTTATTCA CAACCTCAAC AGGTAAGTGA TTTCCGCTTC
GATGATACCG TAGCAGAGGT TTTTCCAGAT ATGATCCAGC GCTCTGTGCC GGGTTATAAC
ACCATCGTCG ATGCAATTGG GCAATTGGCT GGACGCTACG CTACAAACAA TTCCAATATA
TACGATCTCG GTTGCTCCCT CGGCGCAGTT AGCTTAGCAG CGGCAAAATA CGTAGTGGCT
GATAACTGTA GTATCATTGC AGTGGATAAC TCTGAAGCTA TGGCTCAGCG GTGTGCCCGG
CACGTAAAAG CGTATAAAGC GAATACTCCC ATAGAGGTGA TTTGCGATGA TTTACAAAAT
ATCCACATCG AAAATGCATC AAGTGTGGTA ATGAACTTCA CATTGCAATT TATCGACCCC
ACTCAGCGTG ATCAGATTAT TCAGAGCATA TACGATGGCT TAGCACCGGG TGGAATTTTC
ATACTTTCAG AGAAGCTTCG CCACGCATCA GAGCAAGGGA ATGAGTTACT AATTGACCTT
CATCATGAGT TTAAAAGGCG CAATGGTTAT AGCGAGCTAG AGATAAGTCA AAAGCGTGAA
TCAATTGAAA ACATTTTGCG GGCTGAAACG TTTGAGGCGC ATCAAACCAG ACTACAAAAT
GCTGGTTTTG ACGATGTCGT ATTGTGGTTT CAGTGTTTTA ACTTTGCCTC CATTGTCGCG
ATCAAAAGCT AA
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| Protein sequence | MQSSKDAIYS QPQQVSDFRF DDTVAEVFPD MIQRSVPGYN TIVDAIGQLA GRYATNNSNI
YDLGCSLGAV SLAAAKYVVA DNCSIIAVDN SEAMAQRCAR HVKAYKANTP IEVICDDLQN
IHIENASSVV MNFTLQFIDP TQRDQIIQSI YDGLAPGGIF ILSEKLRHAS EQGNELLIDL
HHEFKRRNGY SELEISQKRE SIENILRAET FEAHQTRLQN AGFDDVVLWF QCFNFASIVA
IKS
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