| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4026 |
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| Symbol | |
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| ID | 4175815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4849503 |
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| End bp | 4850474 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057062 |
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| Product | putative methyltransferase |
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| Protein accession | YP_663579 |
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| Protein GI | 109900324 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | [TIGR00452] methyltransferase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGTCC CTTGGTTCAA CCAGTTTTAT AAAGAAATTG CCGACTCCCC GCTAAGTGCT
TGGTTAGAGC TTCTTCCCGG GCAAATTTCT ACCTGGCAAA AAGAGCAGCT ACACGGTGAT
TTCAACAAGT GGGTAAAGCT GCTTGGCAAG CTGCCTCAGA CTCATCCTAG TGAAATTGAG
CTCAAAGAGA GGGTTGAATT TGGGCTGCAA AGCGAGATAA ACGAGTATAC GCAGAAGCAA
ATTATAGGCT TACTTAAGCA GTTTATGCCA TGGCGTAAAG GGCCATTTCA TATTCATGGT
ATTCATATTG ATACAGAGTG GCGGTCCGAC TGGAAATGGG AAAGAGTACA ACCGCATATA
CAGTCGTTAG AAAATCGTTA TGTTCTTGAT GTTGGTTGCG GCAGTGGCTA CCACATGTGG
CGTATGCTAG GAGAAAACGC CAAAATGGTG GTGGGCGCGG ACCCTTCTCA GTTATTTTTG
ATGCAGTTCC AAGCCACTAA GCATTTTAAC CCCGACCCAC GCATTCATTT ATTGCCCGTA
GGTGTTGAGC AGCTACCTGA AAAAAATGCC TTTGATACGG TTTTTTCAAT GGGGGTACTG
TATCACCGAA AAAGTCCACT CGATTTTTTA CAACAGCTAA AAAATCAGTT GCGACCCGGT
GGCGAGCTCA TTCTCGAGAC ACTTGTAGTT GAGGGAGATG AAAATACTGT ATTGATGGCC
GGGGACAGGT ACGCTCAAAT GCGCAACGTA TGGTTTTTGC CTAGTACAGA TGCCTTGTGT
TTATGGATGA AACGACTGGG CTTTAAAAAT GTGCGCGTGG TAGATTTAGC AAAAACTACG
ATAGAAGAGC AGCGCGCAAC GCAGTGGATG GACAGTCAAT CTTTGGTTGA TTTTCTTGAC
CCGAATGATC ACTCAAAAAC CATTGAAGGC TATCCTGCGC CCCTGAGGGC CGTTGTTGTG
GCTGAGCGAT AG
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| Protein sequence | MSVPWFNQFY KEIADSPLSA WLELLPGQIS TWQKEQLHGD FNKWVKLLGK LPQTHPSEIE
LKERVEFGLQ SEINEYTQKQ IIGLLKQFMP WRKGPFHIHG IHIDTEWRSD WKWERVQPHI
QSLENRYVLD VGCGSGYHMW RMLGENAKMV VGADPSQLFL MQFQATKHFN PDPRIHLLPV
GVEQLPEKNA FDTVFSMGVL YHRKSPLDFL QQLKNQLRPG GELILETLVV EGDENTVLMA
GDRYAQMRNV WFLPSTDALC LWMKRLGFKN VRVVDLAKTT IEEQRATQWM DSQSLVDFLD
PNDHSKTIEG YPAPLRAVVV AER
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