| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3999 |
|---|
| Symbol | murB |
|---|
| ID | 4175783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 4813218 |
|---|
| End bp | 4814255 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638057031 |
|---|
| Product | UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| Protein accession | YP_663553 |
|---|
| Protein GI | 109900298 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0812] UDP-N-acetylmuramate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0132231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAAAA TAGCGCAAAA TCGCCAATCG GTTGTTATAT TGAAATCTCT GCAACAGCTC
CACACCTTTG GGTTACCCGC ACACTGTACT GACTTTGTCA GTATTAAAAG TGTGCACAGT
GCACACACCT TTATCGCTCA ACACCAAAAA CAGCCCTTTT ACCTGTTAGG ACAGGGCAGC
AACACCGCCT TTGTGGCTGA TTATAAAGGC ACGGTGGCAG AAGTAGCGCT TAAGGGAATT
GGCGTGCAAG AGAATGAATC GCACTACATC ATTAAGGCAG CCGCGGGGGA AAGTTGGCAT
GAACTGGTCG TTTATTGCCT GAAACACACC ATGTATGGAT TTGAAAATTT AGCACTTATC
CCAGGTACTG TCGGCGCAGC GCCAATTCAG AATATTGGTG CTTACGGTGT TGAAGTTGAG
CGCTTTATTC AATCTGTCCA ATATATCGAC TTGAAGACGA ATCAAGTTCA CAGTATTGCA
GCAAAAGATT GCGAGTTTGG TTATCGAGAC AGTATTTTCA AGCATGCCCT ATGGCAAAAG
GCCATGATTG TGGGGGTAAC CTTCTTATTG CCAAAAGCGT GGCAGCCCGT TGTTACTTAT
GGTGAATTAG CTGCTTTACA TGCCCCAAGT GCACAGGACA TATTTAACAA GGTAGTAGAA
GTACGCCAAG CAAAATTGCC CGATCCAAGT GTATTGGGCA ATGCTGGTAG TTTCTTCAAA
AATCCCATTA TCAGTTGCGA TAACCTTGCA GCATTGCACC AGCAGTTCCC ATCAATGCCT
TTCTATCCCT TAGATACTAG GACAGTAAAA ATACCCGCGG CATGGCTAAT CGATCAGCTA
GGTTTTAAGG GGCAGTTTGA AGGCGGGATT CGTTGTCATC CCAAACAAGC GCTCGTATTA
ACAAATGCCG AGCAAGGCAC AGGCGAGCAA CTTTTATCGC TAGCTAGGCG GATTAAAAAT
GCTGTTGCAG AGCAGTTCAG CATTGACTTA GAGCACGAAG TACAACTTAT TGGCGCCAAG
GGAAGGGTTT TATTATGA
|
|---|
| Protein sequence | MAKIAQNRQS VVILKSLQQL HTFGLPAHCT DFVSIKSVHS AHTFIAQHQK QPFYLLGQGS
NTAFVADYKG TVAEVALKGI GVQENESHYI IKAAAGESWH ELVVYCLKHT MYGFENLALI
PGTVGAAPIQ NIGAYGVEVE RFIQSVQYID LKTNQVHSIA AKDCEFGYRD SIFKHALWQK
AMIVGVTFLL PKAWQPVVTY GELAALHAPS AQDIFNKVVE VRQAKLPDPS VLGNAGSFFK
NPIISCDNLA ALHQQFPSMP FYPLDTRTVK IPAAWLIDQL GFKGQFEGGI RCHPKQALVL
TNAEQGTGEQ LLSLARRIKN AVAEQFSIDL EHEVQLIGAK GRVLL
|
|---|
| |