| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3987 |
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| Symbol | hemH |
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| ID | 4175767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4798425 |
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| End bp | 4799507 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057015 |
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| Product | ferrochelatase |
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| Protein accession | YP_663541 |
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| Protein GI | 109900286 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0276] Protoheme ferro-lyase (ferrochelatase) |
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| TIGRFAM ID | [TIGR00109] ferrochelatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.189595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACC GTTCTAATGA AACGTTTACC CATAAGCAGG CTGATAAAAT TGGTGTACTG
ATCACTAATT TAGGTACACC AGAAGCGCCC GAAAAAGGCG CTTTGAAACG CTATTTGCGC
GAGTTTTTAT CAGACACAAG AGTGGTTGAA GTGCCTAAAC TAATTTGGTG GATGATTCTT
AACTTAGTGA TCCTAAACAT TCGGCCTAAG CGATCGGCCC ATGCTTATAG CACTGTATGG
ACCGATCGCG GCTCGCCGCT TATGTTTCAT ACGCAAGATC AAACCAATGC GCTTGCCACA
AGTATGCAGC AAAAGTACGG CGACAAAGTA GTGGTAGATT TTGCTATGCG CTATGGCTCG
CCGTCGATTG AATCAGTCAC TCAGAACATG CTTGAAAAGG GGGTGCGTCA ATTGCTGGTG
TTGCCGCTTT ATCCTCAGTA TAGCGGGGCA ACGAATGGTT CGACTTTTGA TGCCTTGGGC
GAGGTATTGC GCAAAACCCG TTGGATACCA GACGTTAGGT TCATCAGTCA CTACCATGAT
TTTACGCCTT ATATCGACGC GGTAGCAGGC AGCATTACCG AACACTGGGC CACTCATGGA
CGAGCCGATA AACTCATATT TACCTACCAT GGGATCCCAA AACGGTATCT GACCGCTGGC
GACCCGTACC ACTGTGAGTG TTATAAAACC TCGCGTTTAG TGGCGGAAAA GCTTGGTCTT
GGTAAACATG AGTATATGGT GACGTTTCAA TCTCGCTTTG GTCGAGAAGA GTGGTTGCAA
CCTTATACCG ATCATACCCT TAAGTCTTTG CCAGAGCAGG GTGTTAAGTC AGTGCAAATG
ATTTGCCCTG GTTTCTCCGC TGATTGCTTA GAAACGATTG AAGAAATCGG CATTGAGAAC
AGAGACTATT TTCTGGAAGC TGGTGGGCAG CGCTACGAAT ACATCGCTGC GCTCAATGCA
CAGCCACAAC ACATTGCCGC GCTTGAGAGC TTGATTGAAA AGAACCTAGG TGGCTGGGAG
TGCCCAGACC GAAATAGTCA ATTAAGCGCT GACTTAGCCA CCGCCATGGG GAGTGATAAA
TAA
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| Protein sequence | MKYRSNETFT HKQADKIGVL ITNLGTPEAP EKGALKRYLR EFLSDTRVVE VPKLIWWMIL
NLVILNIRPK RSAHAYSTVW TDRGSPLMFH TQDQTNALAT SMQQKYGDKV VVDFAMRYGS
PSIESVTQNM LEKGVRQLLV LPLYPQYSGA TNGSTFDALG EVLRKTRWIP DVRFISHYHD
FTPYIDAVAG SITEHWATHG RADKLIFTYH GIPKRYLTAG DPYHCECYKT SRLVAEKLGL
GKHEYMVTFQ SRFGREEWLQ PYTDHTLKSL PEQGVKSVQM ICPGFSADCL ETIEEIGIEN
RDYFLEAGGQ RYEYIAALNA QPQHIAALES LIEKNLGGWE CPDRNSQLSA DLATAMGSDK
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