Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3979 |
Symbol | |
ID | 4175759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4790349 |
End bp | 4791647 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638057007 |
Product | GTP-binding protein, HSR1-related |
Protein accession | YP_663533 |
Protein GI | 109900278 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTGACC GTTATGAAGC AGGCGAACAG GCTGTATTAG TACATATAGA TTTTTCTGAT GACAACAGCA AAGAAGATCT ACTAGAACTT CAGTTGTTGG CCACATCTGC GGGAGTAAAC GCGGTTGATG TCGTTACTGG CAGCCGTAAT GCTCCTCATA CGCGCTATTT TGTCGGCAGT GGCAAAGCAG AAGAAATAGC GAACACCGTT AGAGCATCTG AAGCTGATGT GGTTATTTTT AATCACAGCT TATCGCCCTC TCAAGAACGT AACTTAGAGC AATTATGTAA ATGCCGTGTG CTGGATCGCA CCGGATTGAT TTTAGATATT TTTGCGCAAC GTGCACGTAC CCACGAAGGT AAGTTACAAG TAGAGCTCGC CCAACTTAAA CATATTTCTA CACGTCTTAT CCGCGGCTGG ACTCACCTTG AGCGTCAAAA AGGCGGGATA GGCTTGCGTG GTCCAGGCGA AACACAATTA GAAACCGACA GACGTTTGCT GCGTGCGCGT ATTAAAAGTA TTCAGGGGCG GTTACGCAAA GTACAAAAAC AGCGTGAACA AGGCAGGCGC GCGCGAGTGC GGGCTGAAAT TCCGACCCTA GCGCTTGTGG GTTATACCAA TGCCGGTAAG TCGACCTTGT TCAATACGAT CACTCAGTCT GAGGTATACG CAGCGGATCA ACTATTTGCC ACGTTAGACC CAACATTGAG ACGAATTGAG TTACAGGACG TTGGCCCAGC AATATTGGCT GACACGGTTG GATTTATTCG CCATCTTCCT CATGATTTGG TCGCCGCTTT CAAGGCAACA CTTCAAGAAA CGCAGCAGGC AGATTTATTG CTCCACGTGG TTGACTATTC CGATGACCAA TTTCGTGAGA ATATCGATCA GGTTAATGAG GTATTGGACG AGATTGACTC TGACGAAATA CCCCAATTAA TGATTTGTAA CAAGATTGAT CGCATGGACG GCGTTGAGCC ACGGATCGAT CGAGATGAAA ACGGCGTACC AACTCGCGTC TGGATGTCGG CACAGCAAGG CTTAGGAACT GAATTATTGT TCGAAGCACT GAGCGATTGC CTAGCACAGA ATATGGTGCG GCATCAGTTA CGCATTCCGC CGCAAGAAGG TAAACTACGA GGTGATTTGT TTAATTTAAA CTGCATCTCT GAAGAATCTT ATGCCGATAA TGGTGACTGG TTAGTAGAGA TACATATGCC TCTTGCAGAT TGGCAGCGTT TGGCAAAACA CTCTGATGCT GATTTAGCAG CCCTTATTGT GAAAAGCACT GAAGCATAG
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Protein sequence | MFDRYEAGEQ AVLVHIDFSD DNSKEDLLEL QLLATSAGVN AVDVVTGSRN APHTRYFVGS GKAEEIANTV RASEADVVIF NHSLSPSQER NLEQLCKCRV LDRTGLILDI FAQRARTHEG KLQVELAQLK HISTRLIRGW THLERQKGGI GLRGPGETQL ETDRRLLRAR IKSIQGRLRK VQKQREQGRR ARVRAEIPTL ALVGYTNAGK STLFNTITQS EVYAADQLFA TLDPTLRRIE LQDVGPAILA DTVGFIRHLP HDLVAAFKAT LQETQQADLL LHVVDYSDDQ FRENIDQVNE VLDEIDSDEI PQLMICNKID RMDGVEPRID RDENGVPTRV WMSAQQGLGT ELLFEALSDC LAQNMVRHQL RIPPQEGKLR GDLFNLNCIS EESYADNGDW LVEIHMPLAD WQRLAKHSDA DLAALIVKST EA
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