Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3978 |
Symbol | |
ID | 4175758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4790072 |
End bp | 4790323 |
Gene Length | 252 bp |
Protein Length | 83 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638057006 |
Product | RNA chaperone Hfq |
Protein accession | YP_663532 |
Protein GI | 109900277 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAG GGCAGTCTTT ACAAGACCCA TTTTTAAATG CGCTACGCAA AGAGCGTATT CCTGTATCAA TTTATCTTGT CAACGGGATT AAATTGCAGG GTCAAGTTGA GTCATTTGAC CAATTTGTCA TTTTGCTAAA AAACACCGTC AGCCAAATGG TATATAAGCA TGCAATTTCT ACCGTCGTTC CTTCACGGGC GTTACCGGTT GCTGCTACTA ATCCTCATGC GGATGCTGAC GAGAACCAAT AG
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Protein sequence | MAKGQSLQDP FLNALRKERI PVSIYLVNGI KLQGQVESFD QFVILLKNTV SQMVYKHAIS TVVPSRALPV AATNPHADAD ENQ
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