| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3976 |
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| Symbol | |
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| ID | 4175756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4787142 |
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| End bp | 4789061 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057004 |
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| Product | DNA mismatch repair protein MutL |
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| Protein accession | YP_663530 |
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| Protein GI | 109900275 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
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| TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCAGCCA CCAGTGCAAC GATACGTATT TTACCCGCTC AACTTGCTAA CCAAATCGCC
GCAGGTGAAG TGGTGGAAAG ACCTGCGTCT GTTGTTAAAG AGTTAGTCGA AAACAGTCTC
GACTCTGGGG CCAGTCAAAT TGATATCGAA ATAGACAAAG GTGGGCATAA ACGCATTTGT
ATTCGCGACA ATGGCGGTGG TATCGAAAAA GACCAGCTGG CACTTGCTTT AAGTCGCCAC
GCCACCAGTA AAATTAGCTC CCTAGACGAC TTAGAGCACA TTCACAGTTT GGGCTTTCGC
GGAGAAGCTT TAGCCAGTAT TAGCTCAGTG GCACGCTTAA CATTGACCTC AAAACCCATA
AATCAGCCAC AGGCATGGCA AGCCCACGCA GAAGGACGCG ACATGCAGGT ACAATTAAAC
CCTGTGGCTC ATCCTGATGG CAGCAGTGTT GAGGTGATTG ATTTATTCTT TAACACCCCT
GCTCGGCGTA AATTTTTACG GGCTGAAAAA ACTGAGTTCA ATCATATTGA TGAAGTCATC
AGGCGTATTT CGTTAAGTCG CTTCGATGTG AGCTTTAGCT TAAAGCACAA TGGTAAATTA
CTGCGCAAAT ACCCTGCGCT TACTGAGCAA ACCGATCACC TTAAACGCTT AGGGGCGATT
TGTAATAAGG ATTTTGCCAA TACGGCCATC GCTTTAGACA GCCACTATCA AGATATGGAA
TTAATCGGCT GGATAACCCC GCCTGATGCA ACGACCCAGC AATCCGATGT GCAGTATTTC
TACGTAAACG GTCGCATGAT GCGCGATAAG TTGATTAACC ACGCCATTCG CCAAGCGTTT
GAAGGCGTTA TCAGCCCTGA TTCATCGCCA AATTACGTGC TGTACTTAAA CATTGCGCAC
CACGAAGTGG ATGTAAATGT GCACCCAGCC AAACATGAAG TACGCTTTCA TCAAGCTCGT
TTAGTCCATG ATTTTATCTT TCGTGCGCTT GCTGATGGCA TCCATCAATA CTTTAGCAAC
ACACCAGCGC AATCTGGGCC CAGCCAGTTG GCAGAGGTGG CGCTGCAACA CGACTACATT
GCCCCTCTTC AATCGGCCCA GCAATCATCT ACCGGTGTTG CTGAAGGGGA GCCAGCTTCC
CAGATGCATT CTTCATCGCC AGATTATTCG TCGGCCCTAA GTAGCGAGTC ATTAACCTCT
GACAACCACC CACTCAACAA TACAGCTGGG CGCGTTCAAG CTCCTGGCTC TGGCTCTGGC
TCTGGCTCTG GCTCTGGCTC TGGCTCTGGC TCTGGCTCTG GCAATAGTTT ATCGGCACAG
GCGGTAAAAG GTTACCAACA ACTCATGAGC GCCCAGCATG TGCTTAACAG TGACGTGACA
CACTCCGCCC AGAATGAGCA CTTATGCGTG CCGGTGGACG AAGAAAGACT ATTGGTGCTG
TTTGAAGCTC AGCACTATGT GTTAACTATC CGTGCCCTTG TGGCGGCGCA TATCAGTACC
ACCTTTGATA CAGATAACTG TGTGTCACAA CCATTGCTGA TGCCAGTTTC AATTGTCGCT
GACCAGCCCG CGCTTCAGCG AGCACAAGCC ATGTATGAAG CGCTACTGAA TAACCGTGTA
GAAATCGGTT GGAGTCAAAA GCGCGTTATC TTGAAAAAGG TACCATCTGG TATGCGCCAT
CTACCTTGGG CAAACATACT GCCCGAGTTA CTTGATAACG CCGTTTCAGG TGAAAACGAG
GTTAAAACAC ATTTATTTAA TTGCATCGCA TTGCATTCAC CAAAACTTAC CCCACTTCAG
ATTCATGAAA CGTGGACAGC ACTCATTGCT TACCCACGTA CGTTTGAAAC TTTGATGAAT
ACAGCGGTGT TATTACCGCT GGCAACTTTA GTAAGCGCCC ATATTGAATC AACACACTGA
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| Protein sequence | MSATSATIRI LPAQLANQIA AGEVVERPAS VVKELVENSL DSGASQIDIE IDKGGHKRIC
IRDNGGGIEK DQLALALSRH ATSKISSLDD LEHIHSLGFR GEALASISSV ARLTLTSKPI
NQPQAWQAHA EGRDMQVQLN PVAHPDGSSV EVIDLFFNTP ARRKFLRAEK TEFNHIDEVI
RRISLSRFDV SFSLKHNGKL LRKYPALTEQ TDHLKRLGAI CNKDFANTAI ALDSHYQDME
LIGWITPPDA TTQQSDVQYF YVNGRMMRDK LINHAIRQAF EGVISPDSSP NYVLYLNIAH
HEVDVNVHPA KHEVRFHQAR LVHDFIFRAL ADGIHQYFSN TPAQSGPSQL AEVALQHDYI
APLQSAQQSS TGVAEGEPAS QMHSSSPDYS SALSSESLTS DNHPLNNTAG RVQAPGSGSG
SGSGSGSGSG SGSGNSLSAQ AVKGYQQLMS AQHVLNSDVT HSAQNEHLCV PVDEERLLVL
FEAQHYVLTI RALVAAHIST TFDTDNCVSQ PLLMPVSIVA DQPALQRAQA MYEALLNNRV
EIGWSQKRVI LKKVPSGMRH LPWANILPEL LDNAVSGENE VKTHLFNCIA LHSPKLTPLQ
IHETWTALIA YPRTFETLMN TAVLLPLATL VSAHIESTH
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