| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3975 |
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| Symbol | |
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| ID | 4175755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4785800 |
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| End bp | 4787092 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057003 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_663529 |
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| Protein GI | 109900274 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTCT TGGTCGTTCC TGCCAGTTTC GCCAAAAATG CCATTGATAG TGTCCGAATT
TGGCCCTCCC CCGGCAGCAC TCGGATCGTA TTTGATCTTG AAGACACACC TGAATATAGC
TATTTCACCT TAGGTAACCC TGAGCGCTTA GTCATTGATT TGGCGGACAC TGAGAAAAAT
TTCGACTTTG CTAAACTCGC GAATAAGAGC CCTTTAGTCA AAAAAGTTCG CTATAGCTCA
GCCAAAGAAA AAGGCAGCAT ACGGGTTGTC ATTGAGTTAA AGAAAAAGCT CGAAAGCACG
CTATTTGCCT TGCCACCGAC CGAGCCCTAT CGAAATCGTT TAGTAATAGA TTTAGATGAT
AAAAACGCCC CTCAAACTGC CCCTACTGTT GTCAAACACA ATAATTCTCA ACAATCACGC
GACATTGTGA TCGTGTTAGA TGCTGGCCAT GGCGGTGAAG ACCCTGGGTC TATTGGCCGC
GGCGGCACAT TTGAAAAAAA TATCACCCTG AATGTCGCCC AGCGCTTAGC CAAACTGATC
GATGCCGAAC CCGGAATGAA AGCGGTTATG ACGCGCTCAG GCGATTATTA TATTTCCCCT
AATAAACGCC CCGACATCGC CCGCAAGCAC AAGGCAGACT TGCTGATATC AATACACGCC
GACGCCTTTA CTACACCTCA ACCGCGAGGG GCTTCGGTGT GGGTATTATC TATGCGCCGC
GCTAATTCAG AGTTAGGCCG TTGGATGGAA AAATCTGAAC GCCACTCTGA GCTACTTGGA
GGGGCTGCAG AGGTCATTCA AGACACCGCA AGCGAGCGCT ACTTAACACA AGCCTTGCTA
GATATGTCTA TGGATCACTC TCTCACCACC AGTTACGATT TAAGCCGTAA GGTCATAGGC
AAGTTGCGGG GCATCACCAG AATGCACAAA AAAATCCCCC AAGCGGCTAG CTTAGCGGTA
TTAACCGCGC CTGATATTCC GTCCATTTTG GTTGAAACGG GTTTTATCTC AAACCCAAGC
GAAGAGAAGA ATTTGAATTG GTCCAAATTC CGTCAGCAAC TGGCCGATTC AATCTTTACA
GCGGTGAAAA CCCACTTTTT AGACTCCCCG CCTGATGATT CATTATGGGC AAAACAGAAA
CGTCATAATC GTACTCACAG AGTGCGCAGC GGCGAAAGCC TATCGTTACT TGCCCAGCGC
TACAATGTAG ACGTAGGTGA TATTAAAGCC GCGAATAACT TAAGCTCCGA TGTAGTACGC
ATAGGACAAG TGCTGACTAT TCCTCGCACT TAG
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| Protein sequence | MLLLVVPASF AKNAIDSVRI WPSPGSTRIV FDLEDTPEYS YFTLGNPERL VIDLADTEKN
FDFAKLANKS PLVKKVRYSS AKEKGSIRVV IELKKKLEST LFALPPTEPY RNRLVIDLDD
KNAPQTAPTV VKHNNSQQSR DIVIVLDAGH GGEDPGSIGR GGTFEKNITL NVAQRLAKLI
DAEPGMKAVM TRSGDYYISP NKRPDIARKH KADLLISIHA DAFTTPQPRG ASVWVLSMRR
ANSELGRWME KSERHSELLG GAAEVIQDTA SERYLTQALL DMSMDHSLTT SYDLSRKVIG
KLRGITRMHK KIPQAASLAV LTAPDIPSIL VETGFISNPS EEKNLNWSKF RQQLADSIFT
AVKTHFLDSP PDDSLWAKQK RHNRTHRVRS GESLSLLAQR YNVDVGDIKA ANNLSSDVVR
IGQVLTIPRT
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