| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3968 |
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| Symbol | |
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| ID | 4175748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4778260 |
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| End bp | 4780467 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056996 |
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| Product | peptidase S9B, dipeptidylpeptidase IV-like |
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| Protein accession | YP_663522 |
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| Protein GI | 109900267 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.507879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATC TCATTTGGAT CTTGTTATGT TCACTGGTGG TACCGGCAAT GGCAACTGAA
AATCTAACGA TAGAACGCAT TTTTGACTCT CCCGCCTTAG AAGGCAGCTC ACCGAATAGC
GTTAAAGTCT CCCCAGACGG CAAGCGCGTG ACCTTTTTAC AGGGGAAAAC CACAGATTAC
GAGCGTTATG ACCTGTGGGA ATACAACATT GCAACGGGGA AAACCCAAAT GTTGTTCAAC
TCAGACGACT TACATAGCGG CCCTGAAAGC TTATCTGATG AGGAAAAAGC TCGCCGTGAG
CGCATGCGTC TTAGTGGCTC AGGCATAGTG AATTACTTTT GGTCAGACGA TGGCAAGGCT
TTGTTGTTTC CGTTAGCGGG AGATGCTTAC TATTTCCGTT TAGGGGATGA CAAAGCGCAA
AAGATTTTGG ACACAGACGC ATTTGAAACT GATATTCGTT TTTCACCCAA AGCGAACTTT
ATCTCTTATG TACGTGAGCA AAATCTGTTC ATCAAAGATA TCAAGACTCA AGTAGAAACC
CAGCTAACGT TTGATGGCAA AGGTCCAATC AAAAATGCCA TGGCGGAGTT TGTCGCTCAA
GAAGAAATGG GCCGCATGAC CGGCTACTGG TGGTCACCAG ATGAAAGCAA AATCGCTTTT
ACTCAAGTGG ATGAGTCGCC GGTTGACGAA ATTACTCGTA GCGAAATTTA CTCGGACTCT
ATCAAAATGA TCAATCAGCG TTACCCAAGT GCGGGTACGC CGAATGTTAC GGTAAAGCTT
GCGGTAAAAG ACCTTGCTAG CGGCGACACC CAATGGGTTG ACTTAGGTAA AGAGCAAGAC
ATTTACCTTG CTCGGGTAAA TTGGATGAAA GACAGCCAAA CGTTAACCTA CCAATGGCAA
AGCCGTAACC AACAAACACT TGAGCTACGC GCGTTTGACA GCAAAACAGC CAAGCAAAGC
GTATTGCTGA CTGAGTCGAG TAACACTTGG GTTAATTTAA ATGACGACCT GCACTTTTTA
AATGACCAAA AGCATTTTAT TTGGGCATCA GAGAAAAGCG GATATAAACA CCTTTACCTA
TATAAAACTG ACGGCACCTT GGTACGTCAG TTGACGAAAG GCGACTGGGT GGTGGATGAA
ATTGAAGCCA TTAATGAAAA GCAAGGCCTA GTGTATTTTA CTGGCCGCGC TGACACGCCT
CTTGAGCAAC ACATTTACGC AGTCGCTATT GCTGGTGGCG ATATCAAAAA AATAAGCCAA
CGCAGTGGTA CCCACGCGCC TAGCTTCAGC GACGACGCTT CTGTTTATGT GGATAAATTC
TCGACAGCTA ATACGCCGTG GCAGGTCAGC TTGCATCAGG CCGATGGTAC GCACTTAGCT
TGGTTAAGTG AAAATGCGAT TAAAGCAGGT CACCCATTAG CGGCATTGCA AAGGGATTGG
GTTGAGCCAA CGCTCGATAG CTTTGTTACT GAAGATGGCG CAGAGCTTTA TTATCGTTTG
TACACACCGA AAAAAATTCA AGGTAAACAC CCTGTTATTG TTTACGTATA CGGTGGCCCT
CATGCACAAG TGGTGACAAA TAGCTGGGGT GGCAATCGTG GCTTGCTAAT GCAGTATTGG
GCAAATAAAG GCTATGTGGT GTTTTCAGTG GACAATCGCG GCTCGAACTA CCGCGGTAAA
GGCTTTGAAG ATCCCCTCTA TAAGAAAATG GGCAGCACAG AAGTGGATGA CCAAATAGCG
GGGGTAAAAT TCTTGCGTAA ATTGCCTTAT GTCGACCCAG AACGTATTGG TATTTATGGG
CACAGTTACG GCGGTTATAT GTCACTGATG AGCATGTTTA AAGCCGGTGA ATACTTTAAA
GCCGGTGTTG CTGGTGCGCC CGTCACAGAC TGGGGGTTAT ACGATACCCA TTACACCGAG
CGTTACATGG GTAACCCAAA AGAAGATGAA GATGCTTACA TCGCTTCTTC TGTTTTCCCT
TATGCAAAGA ATCTGACCGG TGATTTGATG ATTTACCATG GCATGGCAGA CGATAACGTA
TTGTTTACTA ACAGCACCAA GCTATATAAA CATTTACAAG ATTTGGCTAT CCCGTTTGAA
AGCATGGATT ACCCAGGCAA GAAACACAGT ATACGTGGCA AGCAAACAGG TATTCATTTG
TTTCACACTA TTACTAACTT CTTTAATCGT CATTTCGATA TGAAGTAA
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| Protein sequence | MKNLIWILLC SLVVPAMATE NLTIERIFDS PALEGSSPNS VKVSPDGKRV TFLQGKTTDY
ERYDLWEYNI ATGKTQMLFN SDDLHSGPES LSDEEKARRE RMRLSGSGIV NYFWSDDGKA
LLFPLAGDAY YFRLGDDKAQ KILDTDAFET DIRFSPKANF ISYVREQNLF IKDIKTQVET
QLTFDGKGPI KNAMAEFVAQ EEMGRMTGYW WSPDESKIAF TQVDESPVDE ITRSEIYSDS
IKMINQRYPS AGTPNVTVKL AVKDLASGDT QWVDLGKEQD IYLARVNWMK DSQTLTYQWQ
SRNQQTLELR AFDSKTAKQS VLLTESSNTW VNLNDDLHFL NDQKHFIWAS EKSGYKHLYL
YKTDGTLVRQ LTKGDWVVDE IEAINEKQGL VYFTGRADTP LEQHIYAVAI AGGDIKKISQ
RSGTHAPSFS DDASVYVDKF STANTPWQVS LHQADGTHLA WLSENAIKAG HPLAALQRDW
VEPTLDSFVT EDGAELYYRL YTPKKIQGKH PVIVYVYGGP HAQVVTNSWG GNRGLLMQYW
ANKGYVVFSV DNRGSNYRGK GFEDPLYKKM GSTEVDDQIA GVKFLRKLPY VDPERIGIYG
HSYGGYMSLM SMFKAGEYFK AGVAGAPVTD WGLYDTHYTE RYMGNPKEDE DAYIASSVFP
YAKNLTGDLM IYHGMADDNV LFTNSTKLYK HLQDLAIPFE SMDYPGKKHS IRGKQTGIHL
FHTITNFFNR HFDMK
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