Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3964 |
Symbol | |
ID | 4175744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4774574 |
End bp | 4775626 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056992 |
Product | peptidyl-arginine deiminase |
Protein accession | YP_663518 |
Protein GI | 109900263 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.582867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTAC TCCCTGAATG GGCGCCTCAA GAAGCCATTA TTCTTGCGTG GCCTGACCAA GAAACAGACT GGCAACCTTG GCTTGTAGAC GTTCGCCAAG TCTATTTGAC GATTATGGCT AACCTTAACC AAGCTGGTAC TGGTGTCATA CTGCTTATTC GCGACCAAGA AATCCCTGCC TTTAAAACCT TGAGCCAAGA TTTTAAACAG CCCATTGATC GCGTGCTATT AGTACACGCC GATTATAACG ACACTTGGGT ACGAGATTAT GGCTTTTTAA CCTGCCATAG TTCAGGTGGC ATGCAGCCTA TCGAGTTTAA CTTTAACGGC TGGGGCAATA AATTCGACGC TAACAAAGAC AATCAGATAA ACCAGCAAGT ATTAGCAGGC TTATGCCGTT TACCGTTGCA GAGTTTCGAT ATTGTCGCTG AAGGCGGTGC GCTAGAAATA GACGATGCAG GTGTGTTGCT CTCTACTGAG TTTTGTTTAT CGAACCCTGA GCGTAATGGT GACATGACGA TGTCTCAATA TCGCGGGGCA TTCAAAGTCG CTTTAGGCGC TAAGAGTGTG CATATATTCC AACAAGGGCA TTTAGAAGGT GATGACACAG ACGGCCACAT TGACACCCTA GTTCGGTTTA CCCCTCACGA TGGCCTAGTC GTGCAGTCAG CATTTAATGT ACCCGATGAC ACTCACTATG CCGGCTTAGC AGCCCTGGTC GACGAGTGCA AAGCTGCTAT GCCCAAACAT CAAATCTTCG AACTTCCCTT GCCCCAAGTG TTTAACCAGC AAGGCGAACG CTTGCCTGCT TCTTATGCCA ACTACTTGAT AAATAATAAA CAGATCTTAT GTCCTGTATA TCAGCAGCCA CAAGATCAAC TTGCCATGGA TATAATGGCA AAGGCTTATC CTGAACATAC AATCGTGCCA ATAAATTGCT TACCTTTGGT TCAGCAATTC GGCAGCTTGC ATTGTATTAG TATGCAAGTT CCGGTGAGTA CATTAACGTT CGACATTAGC AAGAAACTAG CAACAGGAGT CAGTCAGTTA TGA
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Protein sequence | MRLLPEWAPQ EAIILAWPDQ ETDWQPWLVD VRQVYLTIMA NLNQAGTGVI LLIRDQEIPA FKTLSQDFKQ PIDRVLLVHA DYNDTWVRDY GFLTCHSSGG MQPIEFNFNG WGNKFDANKD NQINQQVLAG LCRLPLQSFD IVAEGGALEI DDAGVLLSTE FCLSNPERNG DMTMSQYRGA FKVALGAKSV HIFQQGHLEG DDTDGHIDTL VRFTPHDGLV VQSAFNVPDD THYAGLAALV DECKAAMPKH QIFELPLPQV FNQQGERLPA SYANYLINNK QILCPVYQQP QDQLAMDIMA KAYPEHTIVP INCLPLVQQF GSLHCISMQV PVSTLTFDIS KKLATGVSQL
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