Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3959 |
Symbol | |
ID | 4175739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4766965 |
End bp | 4768407 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638056987 |
Product | hypothetical protein |
Protein accession | YP_663513 |
Protein GI | 109900258 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.901643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAG ATCATTCATA TGCAACGCAT TTAGGTGATT TAGGCGCCTT AACTAAGCCT TTGCGTGTGG CAAACCCTCA ACTTGTTGAG GTTAACCACA CCTTACGCGA CGCACTGCAA CTACCAGCAT CATGGTTTAC GCAATCTAGC ATAATGTCGA TGCTTTTTGG CAATACAAGT TCATTTACGA CACATTCTTT TGCACAAAAG TACGGTGGTC ATCAGTTTGG TGGATGGAAT CCAGACTTAG GTGATGGACG TGGTGTATTG CTTGGAGAAG CGAAAGACAA ATTCGGAAAA TCATGGGATT TGCATCTTAA AGGCGCTGGT CCTACGCCCT ATTCACGCTT CGCGGACGGG CGAGCTGTAT TGCGCTCAAC CCTGCGCGAA TACCTCGCAA GTGAAGCATT GCACCATATG GGTATTCCTA CCTCAAGGGC ACTTTGCTTA ATTACCAGTG ACGAACCCGT GTACCGAGAA AAACAAGAAA AAGCCGCTAT GATGATCCGA GTCAGCCAGA GTCATATTCG TTTCGGCCAT TTTGAATACT TTTATCACAA TGGTGAACTG GACAAACTCA AGCGGTTATT TGACTACTGC TTTGAACATC ATTTTTCTGC ATGTTTGCAC AGTGAATCTC CCCATTTAGC CATGCTAGAA AAAATAGTCA CGGATACCGC TACCCTAATT GCAAAATGGC AAGCATACGG TTTTAACCAT GGCGTTATGA ATACTGACAA TATGTCGATT CACGGGATTA CCTTCGATTT TGGCCCTTAT GCTTTTTTAG ATGATTTTAA TCCTAAATTT GTCTGTAACC ATTCTGATCA TCGAGGGCGA TATGCATTTG AGCAACAGCC TAGCGTGGGT TTGTGGAACC TAAATGCCCT TGCGCACGCA TTCACCCCCT ACTTGAGTGT CGAACAAATC AAGGGGGCGC TAAGTCAATA TGAAGCAAGC TTAATGGCTG AATTTTCACA ACTTATGCGC CAAAAGCTTG GGCTGTACGA AAATACCCAA AACACCGCCG AACTAGTGAA TCGTTGGCTC GACCTAATTT ATCAAGACAA GCGTGATTAC CACATTAGCT TTCGATTATT GTGCGAAGTT GATGAACACG GTGAAAATCA GCCACTTGTT GATCACTTCA TACAACGCGA CACGGCTAAA ACTTGGTTAG AACATTATCA AAACGCACTG ATTACTCAAG GTGTAAAGAG GCAAGAACGC CAAGCAAACA TGCGCAATAT TAACCCCGAA TATGTACTGC GGAACTACCA AGCACAACTG GCAATTGATG CAGCACAAAA CGGAGATTTT TCACGTTTTA GAAAGTTATT ACATGTGCTG CAACACCCAT TTGAAAGCAA ACCAGAATAT GCCGAATTTG CTAAACCACC CCCTAACTGG GGTAAACACA TGGAAATATC ATGCAGCAGT TAA
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Protein sequence | MNLDHSYATH LGDLGALTKP LRVANPQLVE VNHTLRDALQ LPASWFTQSS IMSMLFGNTS SFTTHSFAQK YGGHQFGGWN PDLGDGRGVL LGEAKDKFGK SWDLHLKGAG PTPYSRFADG RAVLRSTLRE YLASEALHHM GIPTSRALCL ITSDEPVYRE KQEKAAMMIR VSQSHIRFGH FEYFYHNGEL DKLKRLFDYC FEHHFSACLH SESPHLAMLE KIVTDTATLI AKWQAYGFNH GVMNTDNMSI HGITFDFGPY AFLDDFNPKF VCNHSDHRGR YAFEQQPSVG LWNLNALAHA FTPYLSVEQI KGALSQYEAS LMAEFSQLMR QKLGLYENTQ NTAELVNRWL DLIYQDKRDY HISFRLLCEV DEHGENQPLV DHFIQRDTAK TWLEHYQNAL ITQGVKRQER QANMRNINPE YVLRNYQAQL AIDAAQNGDF SRFRKLLHVL QHPFESKPEY AEFAKPPPNW GKHMEISCSS
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