| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3955 |
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| Symbol | |
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| ID | 4175735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4764293 |
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| End bp | 4765177 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056983 |
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| Product | 5,10-methylenetetrahydrofolate reductase |
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| Protein accession | YP_663509 |
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| Protein GI | 109900254 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTCTT ATGCACAAGG TATCGATGCC CTCAACCAGT CACTGTCAGA AGTGAAAGGG
ATCAATGTAT CATTTGAATT TTTTCCACCT AAAACTGAAA CGATGGAAAA GACACTATGG
AAATCGGTGG AGCGCTTAGC GCCGCTAAAG CCCAAATATA TGTCTGTGAC TTACGGTGCA
AATAGCGGTG AGCGTGATCG TACCCACGAA ATCGTAAAAC GTATTCAGAG CGAAACAGGG
ATTGCCGCTG CGCCGCACTT AACATGCGTA GATGCTAGCC GTGACGAATT AAAGCAAATC
GCCAAAGATT ATTGGGCCAG TGGTATTCGG AAAATTGTAG CTTTGCGTGG TGATTTACCC
GAAGGCTATA CCGAGCATGT ATCTTACGCG TCTGATTTAG TGGCATTACT GCGTGATGTG
GCTGATTTTG ACATCGCCGT TGCAGCATAC CCAGAGAAAC ACCCTGAAGC GCCGAACAGT
CAATTTGACT TGTTAAACCT AAAACGCAAA GCCGATGCAG GCGCGAACCA AGCAATTAGC
CAGTTCTTTT TCGATGCTGA AGTGTTTTTA CGTTTCAGGG ACAGGGCAGC AGCAGCGGGT
ATTGAGATGG ATATCGTACC GGGTATTTTG CCTGTGACGA ACTATCAAAC CCTGCAGCGT
TTTGCAGGCT TTACCAACGT ACACGTACCG AACTGGCTGC ACAAAATGTA TGACGGCCTA
GATAAGGACG ACCAAACTAC TCGTAACTTA ATGGGCGCTA GCATTGCCAT GGACATGGTC
AAAGTCTTAG CAAAAGAAGG CATTCGTGAT TTTCATTTCT ATACTCTGAA TCGCTGTGAA
TTGAGTTATG CTATTTGCCA TATGTTGGGC GTTAGAGCAG ACTAA
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| Protein sequence | MVSYAQGIDA LNQSLSEVKG INVSFEFFPP KTETMEKTLW KSVERLAPLK PKYMSVTYGA
NSGERDRTHE IVKRIQSETG IAAAPHLTCV DASRDELKQI AKDYWASGIR KIVALRGDLP
EGYTEHVSYA SDLVALLRDV ADFDIAVAAY PEKHPEAPNS QFDLLNLKRK ADAGANQAIS
QFFFDAEVFL RFRDRAAAAG IEMDIVPGIL PVTNYQTLQR FAGFTNVHVP NWLHKMYDGL
DKDDQTTRNL MGASIAMDMV KVLAKEGIRD FHFYTLNRCE LSYAICHMLG VRAD
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