Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3954 |
Symbol | rbn |
ID | 4175734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4763354 |
End bp | 4764256 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056982 |
Product | ribonuclease BN |
Protein accession | YP_663508 |
Protein GI | 109900253 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGTCCA AGGTTATTTG GTCGGATGTA TTAAGGAGCT GGTTACCTAA AGCGAATATT TTTGTTCGTA TGTTTGTAAA CCATTGCCAA CGAGATGGGA TCACGGTGTC AGCAGGGCAT TTAGCCTATG TATCCTTATT ATCTCTAGTG CCATTTATCA TGGTGTTCTT CACCATATTG TCGGCCTTTC CTGCTTTTTC TGAGGTGCGA GGTGATATCG AAGCCCTGAT CTTCGGTAAT TTTATTCCGA CTTCTGGGGA CCAAATTCAA GGCTACGTCG CCGAGTTCGT GGGTAACGCA TCAAAAATGG GTGCGATCGG GATTTTATCC TTGGTGGTGG TGGCCTTATT GCTCATCTCG AATATAGACA AAACCTTGAA CCGCATCTGG CAGGCAAAAA GCGAGCGCCC GATCATTTTT ACGTTTGCGA TTTATTGGAT GATCCTCACG CTAGGCCCCT TGTTAATTGG CCTAAGCGTC ATCATGAGTT CTTATTTGGT TGCTTTTGCT AATTCGGCTG AAGCCTACAC CATGGGCGCA ACAACCGCCA TGCTCAAAAT TGTGCCTTTT ATCGCGTCCG TCTGCGCTTT CTTTATTCTG TATATGATTG TCCCTAATAA GCGGATTAAT CCTCGCCATG CCCTCGTTGG TGCGTTCATG GGGGCGCTAC TGTTTGAGTT ATCGAAGAAA GGATTCTCGT TTTACATAAC GCATTTCCCG TCTTATCAAA TGATTTACGG CGCTATGGCC GTTATTCCTA TTTTATTCGT TTGGGTGTAC TTGTCGTGGA TAGTGGTGTT GCTTGGGGCG GAACTAACCC ATGTGATTGA AGTGTTTTTT CACGAAGAAT CTAAAGAGAA TTTTACGCAG GTCGATGAGG ATGACCCCCA ATCGCCTGCG TAG
|
Protein sequence | MESKVIWSDV LRSWLPKANI FVRMFVNHCQ RDGITVSAGH LAYVSLLSLV PFIMVFFTIL SAFPAFSEVR GDIEALIFGN FIPTSGDQIQ GYVAEFVGNA SKMGAIGILS LVVVALLLIS NIDKTLNRIW QAKSERPIIF TFAIYWMILT LGPLLIGLSV IMSSYLVAFA NSAEAYTMGA TTAMLKIVPF IASVCAFFIL YMIVPNKRIN PRHALVGAFM GALLFELSKK GFSFYITHFP SYQMIYGAMA VIPILFVWVY LSWIVVLLGA ELTHVIEVFF HEESKENFTQ VDEDDPQSPA
|
| |