| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3951 |
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| Symbol | |
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| ID | 4175731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4761391 |
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| End bp | 4762359 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056979 |
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| Product | proline iminopeptidase |
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| Protein accession | YP_663505 |
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| Protein GI | 109900250 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAAC TCTATCCTGC AATTAAACCG TTTTTCAGCG AAATGCTAGC GGTTAGCGAC
GATCATTCGT TATATCTGGA ACAAAGTGGT AACCCAAAAG GAATACCTGT GCTGTTTCTA
CACGGGGGGC CAGGGGCAGG ACTGTTTGCT AATTATCGTC GCTTCTTTGA TCCCGATAAG
TACTGGATTA TTGGCTTTGA CCAAAGGGGA AGCGGGCAAT CCACTCCATT CGGTAGCATA
AAGAACAATA CTACCCAAGA TTTACTAAGT GATATTACCC AGATCAGAAA GCACCTGGGT
GTCCAGCAGT GGATCTTATT TGGTGGTTCT TGGGGTGCAA CGTTGGCATT ACTTGCTGCC
ATTGAGCATC CTGAAACGGT GAAAGGGCTG ATCTTAAGAG GCAGTTTCCT GGCGCGAGAA
GAAGATTTCG ATTGGTACCT GGATAAAAAA GGCGGAGCTG CGCAGCTGTT CCCAGACTAC
TATCAAGATT TCATCCTCCC TGTGGCAGAT AAGTCCCTTA CGACGTCGTT AGTTGACGCG
TACTATGAAC TGTTTACTGG CAGCGATGAA GTGCACAAAA TGGCAGCCAT TAAAGCATGG
TGTTTGTGGG AAGCCAGAAT CAGTAAGTTG CACTGTAAAT TACATGAAGA TGAGTTGGTC
CCGGATGTAC ACAGGGGCAT TAGTTTGGCT ATTTTAGAGT GCCATTACAT AAAGCATCTT
TGTTTCATTG AGTCAAATTA CATATTAAAA AATATACACA AAATCAGTCA TATATCGGCA
ACACTCATTC ATGGTCGCTA TGACTGTGTG TGCAAAATAC AAGGTGCCTA TTTACTTAAC
GAAGCTTGGC CTGCAAGTCA GCTTACCATA GTGCCCGAGT CTGGTCACAG CGCCAATGAA
CCCAAAATTA CTGCCGCTCT CTGTTTGGCT TCGACCGCGA TGGCTGATTT TATTAAGGAG
CAGGAATGA
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| Protein sequence | MSELYPAIKP FFSEMLAVSD DHSLYLEQSG NPKGIPVLFL HGGPGAGLFA NYRRFFDPDK
YWIIGFDQRG SGQSTPFGSI KNNTTQDLLS DITQIRKHLG VQQWILFGGS WGATLALLAA
IEHPETVKGL ILRGSFLARE EDFDWYLDKK GGAAQLFPDY YQDFILPVAD KSLTTSLVDA
YYELFTGSDE VHKMAAIKAW CLWEARISKL HCKLHEDELV PDVHRGISLA ILECHYIKHL
CFIESNYILK NIHKISHISA TLIHGRYDCV CKIQGAYLLN EAWPASQLTI VPESGHSANE
PKITAALCLA STAMADFIKE QE
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