| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3950 |
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| Symbol | |
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| ID | 4175730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4760957 |
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| End bp | 4761394 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056978 |
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| Product | D-tyrosyl-tRNA(Tyr) deacylase |
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| Protein accession | YP_663504 |
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| Protein GI | 109900249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1490] D-Tyr-tRNAtyr deacylase |
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| TIGRFAM ID | [TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGGTT TGATTCAACG AGTCAGCGAA GCCAGTGTCT GTGTTGGTAA TGAGGTCATT
GGAGAGATTA ATCAAGGGAT TTTGCTGTTG CTTGGAGTGG AAAAAAATGA CAACGAGGAA
AAGGCCAAAA AGCTGTTTCA GCGCGTGCTG AATTACCGCA TTTTTAGCGA TCAAGACAGT
AAAATGAACC TGAATCTTCA GCAAGTCGGC GGCGGATTAC TTGTGGTCTC TCAGTTCACT
TTGGTGGCGC AGACAAACAA AGGAAATCGG CCTGGGTTTT CTCAAGGTGC ATCGCCAGAA
TTGGGCAAAA CTTTGTATAA TTACTTTGTT GAACTAGGGA GAAGCAGTGA AATACTCTGC
GAGTCAGGTA AATTCGGTGC AGATATGCAA GTTAGATTAA TAAATGATGG CCCCGTGACG
TTCTCCTTAA ACGTCTGA
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| Protein sequence | MIGLIQRVSE ASVCVGNEVI GEINQGILLL LGVEKNDNEE KAKKLFQRVL NYRIFSDQDS
KMNLNLQQVG GGLLVVSQFT LVAQTNKGNR PGFSQGASPE LGKTLYNYFV ELGRSSEILC
ESGKFGADMQ VRLINDGPVT FSLNV
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