| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3949 |
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| Symbol | |
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| ID | 4175729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4759935 |
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| End bp | 4760861 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056977 |
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| Product | thioesterase domain-containing protein |
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| Protein accession | YP_663503 |
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| Protein GI | 109900248 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1246] N-acetylglutamate synthase and related acetyltransferases |
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| TIGRFAM ID | [TIGR02447] thioesterase domain, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.665383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATAAGA TTGAAACCCC AGAAACAGAT GCGGAGTTTG CAGCATATTT TGAATTTCGC
TGGTTAATGC TGCGAAAGCC TTGGAATTAT CCTCAAGGCT CTGAAAAAGA CGAATACGAG
CAAGTCAGTG AACATCGCAT GATCCGTAAT AATAAAGGTG AAGTGATCGC CATTGGCCGG
ATACATATGA ACAGCGCTGA GGAAGCTCAG GTCCGCCATA TAGCTGTCGC CAATGATGCA
CAGGGGCGTG GCTTAGCCAA AATGATCATG TCTTCACTTG AAGCGGTAGC GCGGCAAGAA
GGCGCAGTTC GCATCGTCAC TAATAGCCGA GAGCTTTCTA CTCCGTTTTT CGAGAGTTGT
GGCTTTGAAG TAGAAAAAGA AGCCTCGACT GAGCTAGGGA AGTTAAAACG CCAACAAATG
GTCAAGCGTC TGTTGGCCCA CAACACGATT TTGTTGCACC CAAAATGGTG TAAAGAGTTA
CAAGATACAT GGCACGATAC TATCCCCATT AGCGAGCAGA TGGGGATCAA GCTGTACCAG
TATTCTGGTA AAACATTAGA GAATCGAGCT TCGCTAAATA AAAATATCAA TTTGCACGGG
ACTATGTTCG CCGGCAGTAT TTTTTCCTTA GCCACTTTGA CAGGTTGGGG CATGATTTTT
TTGCAATTAA AGGAGAAGAA TCTTGCAGGG GAGATAGTGT TAGGAGATGG TAATATTCAC
TATCACAAAC CCATCACTAT GCAGCCAAGA GCCTTATGTC ACATCGAAAG TCTGAGCGGC
AAGTTCGAGC CATTAGCGAA AGATAAGAAA TGCCAAATTA AATTACAAGT CGATATTCTC
GATGGGGACA CTGCCGTTGC CGAGTTTAAG GGAGTTTATT GGATTTTACC CCCTGAGACT
GAAGAACGAG ACGCCGAAAG CGCGTAA
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| Protein sequence | MYKIETPETD AEFAAYFEFR WLMLRKPWNY PQGSEKDEYE QVSEHRMIRN NKGEVIAIGR
IHMNSAEEAQ VRHIAVANDA QGRGLAKMIM SSLEAVARQE GAVRIVTNSR ELSTPFFESC
GFEVEKEAST ELGKLKRQQM VKRLLAHNTI LLHPKWCKEL QDTWHDTIPI SEQMGIKLYQ
YSGKTLENRA SLNKNINLHG TMFAGSIFSL ATLTGWGMIF LQLKEKNLAG EIVLGDGNIH
YHKPITMQPR ALCHIESLSG KFEPLAKDKK CQIKLQVDIL DGDTAVAEFK GVYWILPPET
EERDAESA
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