Gene Patl_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3946 
Symbol 
ID4175726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4756175 
End bp4757155 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content45% 
IMG OID638056974 
Producthypothetical protein 
Protein accessionYP_663500 
Protein GI109900245 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2177] Cell division protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00455123 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAT TATTTAAAGG GCGAGCCCAG GGCGCCCAGC TAAGTCAGGT TTCTATCATT 
CAACGCATTC AAATGTTTTT TCTCAGTCAT GTTCGCCAAG CATTAGGCAG TTTGGGGGAA
TTGTGGCGCT CTGGCGCGGC TTCACTGATG ACCATAGGCG TGTTGGGGTT GAGCATCACA
CTGCCTAGCA CCTTATATAT CCTAGTGAAA AATATTGAAC AAGTGAGTTC GGGATGGGAT
CAAGCCTCTG AAATATCCTT ATTTCTAAAA GCTGAAACAT CAAAACAACA CATAGACCAA
CTTCTGACCC GTATAAATTC TTGGCCTGAA GTGAGTAAGG TGACTTACAT CCCTGCGGAT
GACGCGCTAA ATGAGTTTAA AGCGTTGTCA GGATTCGGCG ATGCTATCGC GTATTTAGAT
AAAAACCCAT TACCACCAGT TGTGCTTGTG GCGCCTAGCG AGAAACATGC TGGCCCTGTA
GCGGCGCGTC TGTTGCTTGA TAAGCTGCGC AAAGAGCGCG AAGTCGACAT AGGAAAACTG
GATCTGGAGT GGTTACAGCG CTTAGATGCA CTCTTAACAG TAGCCAAAGA GTTAGTGACG
ATCATTGCGC TACTGCTATT TTTGGCAGTT ATTTTGATTA TTGGTAATAC CATCAGGCTC
AACATCCTAA GCAAAAAAGA TGAAATACTA GTGATGAAAT TAGTGGGTGC AACCGATGCC
TTTATACAAC GCCCCTTTAT GTACACTGGC TTCTGGTATG GTTTATTAGG CGGCCTATTA
GCGTGGTTTA CGGTAGTTGG CTTATTGTGG TGGATGAGCG CCAGCGTTGA GGCAGTGAGC
GCCCTCTATC AAAAGCAATT CAATATTACC GGTGTCGACT TCAGCACCTT GCTTATTATG
CTGTCAACTT CTGTGCTGCT AGGGCTAGTT GGCTCGATGA TTTCAGTAAA ACGACATGTG
AGTGCTATCG AGCCAAAGTG A
 
Protein sequence
MSLLFKGRAQ GAQLSQVSII QRIQMFFLSH VRQALGSLGE LWRSGAASLM TIGVLGLSIT 
LPSTLYILVK NIEQVSSGWD QASEISLFLK AETSKQHIDQ LLTRINSWPE VSKVTYIPAD
DALNEFKALS GFGDAIAYLD KNPLPPVVLV APSEKHAGPV AARLLLDKLR KEREVDIGKL
DLEWLQRLDA LLTVAKELVT IIALLLFLAV ILIIGNTIRL NILSKKDEIL VMKLVGATDA
FIQRPFMYTG FWYGLLGGLL AWFTVVGLLW WMSASVEAVS ALYQKQFNIT GVDFSTLLIM
LSTSVLLGLV GSMISVKRHV SAIEPK