| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3941 |
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| Symbol | |
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| ID | 4175721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4751982 |
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| End bp | 4752572 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056969 |
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| Product | multiple antibiotic resistance (MarC)-related proteins |
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| Protein accession | YP_663495 |
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| Protein GI | 109900240 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00858561 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACTT GGTCTGCGGC CATTACATTA TTTTTGATTA TGGACCCACT AGGTAACCTT
CCTGTGTTCA TGTCTGTGCT AAAAACGATT GAGCCCAAGC GACGCCGTAT CGTTTTGATC
CGCGAATTGA TTTTTTCGCT GTTGATCATG TTGGGATTTT TATTCAGCGG TCAGGCTGTA
TTAGATTTTC TAAGCGTCAA ACAAGAAACG GTGAGCATCG CTGGTGGTAT TATTTTATTT
TTGATTGCCT TGAAAATGAT ATTCCCTCAA CCAGGTGGGG TAACAGGACT GCCGGCAGGT
GAAGAGCCTT TTATTGTCCC TTTAGCCATT CCTATGGTCG CTGGACCGTC CATTCTCGCA
GCCTTAATTT TGTTGGCCAA TCAAGATCAC AGCCGCATGC TGGATTGGTC TTTAGCACTT
TTAGCTGCTT GGTCCGTCAG TGCGGTGATA TTGATGTTTT CGAGTGTATT CCATCGCGTA
TTGGGCGAGC GCGGACTTAT CGCTATTGAG CGTTTGATGG GCATGATCTT AATTATGATT
TCAATTCAAA TGCTGCTAGA TGGCATCGGA AAATTCTATT CGCTGGTGTA A
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| Protein sequence | MDTWSAAITL FLIMDPLGNL PVFMSVLKTI EPKRRRIVLI RELIFSLLIM LGFLFSGQAV
LDFLSVKQET VSIAGGIILF LIALKMIFPQ PGGVTGLPAG EEPFIVPLAI PMVAGPSILA
ALILLANQDH SRMLDWSLAL LAAWSVSAVI LMFSSVFHRV LGERGLIAIE RLMGMILIMI
SIQMLLDGIG KFYSLV
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