| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3934 |
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| Symbol | |
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| ID | 4175714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4745877 |
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| End bp | 4746365 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638056962 |
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| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
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| Protein accession | YP_663488 |
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| Protein GI | 109900233 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
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| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00201199 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAAG TTTATGTTGG GCTAGGGAGC AATTTGGCCC AGCCTCAACA ACAAATAAGC
CAAGCATTAC GGGCAATTGA GTTATTGCCT GCTTCACATA TATCGGCCAC CTCGAGCTTG
TATATCAGTC GCCCTATGGG ACCACAAGAC CAACCTAGCT ATGTTAATGC GGTGGTTGAA
GTGCAAACAA AAATGCAAGC TGTCGAATTT CTCCATTGCT TACAAAAAAT TGAGCTTGAG
CATGGTCGGG TGCGTAAAGC AGAGCGTTGG GGGCCGCGTA CTTTAGATTT AGATATTCTT
ATTTTTGGTA CTCAAATTAT TGATTCAGTT GAACTTACTG TGCCACATTA CGGTATGAAA
GAGCGAGAGT TCGTTTTGTA TCCTTTGCAT GAAATTGCCC CCGAATTACA ACTACCAAAC
GGCACTAAAT TGACCGAATT GCTCATTAAC TGCCCCCTCA ATGGGTTGGA AAAATTACCC
TATAAATGA
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| Protein sequence | MSQVYVGLGS NLAQPQQQIS QALRAIELLP ASHISATSSL YISRPMGPQD QPSYVNAVVE
VQTKMQAVEF LHCLQKIELE HGRVRKAERW GPRTLDLDIL IFGTQIIDSV ELTVPHYGMK
EREFVLYPLH EIAPELQLPN GTKLTELLIN CPLNGLEKLP YK
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