| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3930 |
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| Symbol | |
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| ID | 4175710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4741496 |
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| End bp | 4742221 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056958 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_663484 |
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| Protein GI | 109900229 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGTCTA TTATGAAAGT ATCTCAAGTC ACAGAAAGCT TTAACCTCGA CAATGTCGTG
CCCTTCTTCC AACCGATTAT GGATTTATCC ACTAATCAGG TTTGGCGCTA CGAATGCTTA
GCCCGTTTAA TTACCTTAGG GGAGCACCCG TTTATTCCTA CCGAGTTCCT GTACTTGGTT
GACCGTCAGG AGAGTCGCTC TCAATTGACC GAAACGATTT TTAATCGCAG TGCGCAATAT
TTTCGTGAGC GTGACATCCC GTGGAATATC AATATTAGCC TAGCCGATAT GCAAGACGAA
GGCATTCACC GGTTTTTAAG CAATCAAGCT CAGAGCTACC CCAATCCTCA GCGGGTGGCA
TTAGAAGTGA CAGCGCAAAA CGTGTTGGCA GACACAGATA CCTTTGAAAC ATTTTCCTTT
TTATGCAAAA AGCTGGGCTT GAGCTTGTTT GTTGATAACC TAGAGCCAGA TGTAGGTCAG
GTAGAGCATT TACTCGCTTT ACCTATCAGT GGGGTGAAAA TTTCAGGCCC AGTGTTGGCA
GACCTAGCCA AAAATGAAAA AGCACAAACC GTGATCAAGG CACTGTGCGA ACAGGGGCGA
CGTAAAAATA TTGACTTAGT CGCTCAACAC CTTGAAAGTG AAGAACAATT AAACCTGCTT
AAACATCTTA ATGTGCGTTA CGCCCAAGGC TTTTATTTCA GCCAACCGAA GGCGCAAGCA
CACTAA
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| Protein sequence | MLSIMKVSQV TESFNLDNVV PFFQPIMDLS TNQVWRYECL ARLITLGEHP FIPTEFLYLV
DRQESRSQLT ETIFNRSAQY FRERDIPWNI NISLADMQDE GIHRFLSNQA QSYPNPQRVA
LEVTAQNVLA DTDTFETFSF LCKKLGLSLF VDNLEPDVGQ VEHLLALPIS GVKISGPVLA
DLAKNEKAQT VIKALCEQGR RKNIDLVAQH LESEEQLNLL KHLNVRYAQG FYFSQPKAQA
H
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