| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3919 |
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| Symbol | |
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| ID | 4175699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4728746 |
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| End bp | 4730998 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056947 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_663473 |
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| Protein GI | 109900218 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.681981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGCT CTACCAGTCT AGCTAAAAGT CGCAAAGTGA ATCATGTTTA CAACAAGGGA
CGGTTTCGAT TTCGCTTTGG TATACGCTTA AAATTACTCG CTTTGTCGAT ATTTCTGTTT
GCCATTCCTT GGCTTGGGTA TCAATACGTG TGGGAGCTAG AAAGCTATCT ACGTATTGGG
CAAGAGCAAA CCATGGTTGG CACTGCGCGT GCAGTTGCGA CCGCCTTGCA TGAGCGGCCC
GCTTTATTTG ATACCCAAAG CGCTTACCTG ACCGATGTAA AACCTGGGAC CGACTTATAC
GCCCATAAAA TTCACGACCC AATCCGCTTA GATGGCAAGC TAGATGATTG GTTGGATTAT
CAGCATTTAA GCCTTGAGTA TGGGCGAGCG CATCTACTTG ATTACCTTAA TGACAGCGAC
GATTACCAGC CCAGCAGCTT GCATTTTCGG CATATGGTGG GGCAATTTGG TGAGTACCTA
TACGCCATGT TCGAAGTCAC CGATGAGAGG GTATTGCTAA GGGCTAAAAA CAGTCTGCGG
GTCGACCGGA ATGACTATCT GCAAATAGCC ATGACTGGCC CTGACGGTAG CTTTAAACGC
TATGTTGTGG CTCCGCAAGA GGCAGGCTGG GTTAACGCGT ATTTGCTATC TGAATCTGTG
GACTCTATGC GCCCTGTTTC ACTTGAAACG CAAATTCAAG GCCGATGGTT AAACACTGCT
AAGGGCTACA ACGTAGAACT GCGATTCCCT TTGGCCATGA TGAGTAGCAA AATCGCCTTT
GCCATTACGG ATGTTGACGA CCCACAAACT CGGGAAATAC GCTATCGCAT AGGTACCGCC
AACCCGAACA AGAGCGATAC CCTTGGCACG GTTTTGGTGC CATCACCGGA GATAGAGAAC
ATTCTCAAAG GGTTAAAATA CTCAAACGCA AGGGTATGGG TCATTGATAA ACACAAACGG
GTACTGGCTC GCTCTGGCAA TATTCATAAA TCGGTTGGTT TAAGCAGCAG CGCTTATTCA
TCAAACAAGG ATCAGCAAGC TAGCTGGTGG CAAAGCATAG AGCAGAAATG GTTATTACCC
CTGTACTATC AAATTCTGAC CAAGCCCCCA GCGGATTTTA TTGATGACTT ACAAGATGCG
TATGCGTTGC AAGGACAAGA TATTAATCAA GCGCTAATGG GGACACCGGC CTCTTTATGG
CGCCTAAGCC CAGATAATAA AGCGGTTATT CTGTCGGCGG CGCACCCCAT TTTTATAGAT
GAGAATGTGA TGGGGGCTGT GGTCGTTGAG CAAACCACCA ACGGTATTCG CACGCTAAGA
AACCTCGCCC TCGAAAAACT ATTTCATGTG ATATTAGCCG TGATGGGGTT AGGGACCTTG
GCGCTTTTTT TATTCGCCTC TAGGATGTCG TTTCGCATCC GTAAGCTTAG AAATCAAACA
GAGGCGGCGA TTGACCAGCA CGGTAAAATC ATTGGCACAA TTCCCAGTGC CACCGCGGGA
GATGAAATTG GTGATTTAGC GAACACGTTT AATATCGTGC TGAGTAAACT TGGGCAGTAC
AACACTTATT TGCAAAATAT GTCAGCCCGT TTATCCCATG AGTTGCGCAC CCCTGTGGCA
ATAGTGAAAT CGTCCTTAGA AAATCTGCAA TTAAGTCAGC AGACAGATGA AGATGCCCAG
TACATTGAAC GAGCGCAACT TGGGATTAAA CGCCTCAGCA CGATTTTAAA TAATATGAGT
GAAGCGACCA GATTGGAGCA GGCAGTACAA AGCAACGAGC GAGAGGACTT TGATATGAAC
GCCTTGCTCA GCGGCTATGT CGAAGGTTAT CGAATGACCT ACGCTAGTCA TAAGTTTGCT
TACGTAAACG AGGCAGGGGA TGTGCTGCTG CTCGGCTCAG GTGATTTATT TGGCCAAATG
CTGGATAAGA TCATTGCCAA CGCCCTTGAG TTTAGTCCTG AGCATACCCT TATTTTTATC
CGACTTAGCC TGAAAGAAAG TAAGTATTTA CTTACCATTG AAAATGATGG CCCACCGTTA
CCGAATGATA TGGAGGATAA GCTATTTGAT TCCATGGTAT CGGTACGCCC TGAGCATGCT
ACTTCACAGC CACACCTTGG GTTGGGGCTA TTTATTGCTA AGGCAATTGC ACAATTTCAC
GGTGGTGATA TTCAGATAGA AAACCGTTAT TCAGAAGCGG ATGAGCATCT TGGTGTGCGC
GTATCGTTAG TTTTTTCAAA ACAGCGGTTC TAG
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| Protein sequence | MSRSTSLAKS RKVNHVYNKG RFRFRFGIRL KLLALSIFLF AIPWLGYQYV WELESYLRIG
QEQTMVGTAR AVATALHERP ALFDTQSAYL TDVKPGTDLY AHKIHDPIRL DGKLDDWLDY
QHLSLEYGRA HLLDYLNDSD DYQPSSLHFR HMVGQFGEYL YAMFEVTDER VLLRAKNSLR
VDRNDYLQIA MTGPDGSFKR YVVAPQEAGW VNAYLLSESV DSMRPVSLET QIQGRWLNTA
KGYNVELRFP LAMMSSKIAF AITDVDDPQT REIRYRIGTA NPNKSDTLGT VLVPSPEIEN
ILKGLKYSNA RVWVIDKHKR VLARSGNIHK SVGLSSSAYS SNKDQQASWW QSIEQKWLLP
LYYQILTKPP ADFIDDLQDA YALQGQDINQ ALMGTPASLW RLSPDNKAVI LSAAHPIFID
ENVMGAVVVE QTTNGIRTLR NLALEKLFHV ILAVMGLGTL ALFLFASRMS FRIRKLRNQT
EAAIDQHGKI IGTIPSATAG DEIGDLANTF NIVLSKLGQY NTYLQNMSAR LSHELRTPVA
IVKSSLENLQ LSQQTDEDAQ YIERAQLGIK RLSTILNNMS EATRLEQAVQ SNEREDFDMN
ALLSGYVEGY RMTYASHKFA YVNEAGDVLL LGSGDLFGQM LDKIIANALE FSPEHTLIFI
RLSLKESKYL LTIENDGPPL PNDMEDKLFD SMVSVRPEHA TSQPHLGLGL FIAKAIAQFH
GGDIQIENRY SEADEHLGVR VSLVFSKQRF
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