Gene Patl_3918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3918 
Symbol 
ID4175698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp4728101 
End bp4728697 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content47% 
IMG OID638056946 
ProductNTPase 
Protein accessionYP_663472 
Protein GI109900217 
COG category[S] Function unknown 
COG ID[COG1986] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00258] inosine/xanthosine triphosphatase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.472374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTTA TCCTCGTTTG TTTTAAGGAA GCTACCTTGC ATCAATCTCA AAGACCTACA 
ACGCTGCACG TAGTCGTCGG CTCTAAAAAT CCAGTGAAAG TAAACGCCGC AAAAAATGCT 
ATCAGTATGC TTTACCCTGA TCATGAAATA ACGTGCGAAG GCATGCATGC CCCCTCTGGC 
GTGGCTGAGC AGCCCATGAC CAGTGAAGAA ACACGCATAG GTGCTATTAA TCGGGTGAGT 
TATTGTCAAG CGAATACAAA AGCAGATTTT TATGTGGCGA TGGAAGGCGG CGTCGATAAA 
TTCGAATACG GCCCAGCTAC GTTTGCTTAT GTCGTTATCG CTAACCACCA GCGCGAGTCG 
ATTGGCCGGG GCGCAATTAT GCCTATTCCT GAATCTGTCT ATCAAGCCTT AGCCAGTGGC 
GAAGAGCTAG GCCCATTGAT GGATGAGCTA TTTAACACCC AAAACGTGAA ACAAAAAGGT 
GGGGCAATAG GGTTGCTGAC CAATGGAAAT GCCACCCGAG AAGGCAATTA CACTCATGCA 
ATGGTGTTGG CAATGGCACC ATTTTTACAC CCTGAACTGT ATCCTGTTAA GCAGTAA
 
Protein sequence
MTFILVCFKE ATLHQSQRPT TLHVVVGSKN PVKVNAAKNA ISMLYPDHEI TCEGMHAPSG 
VAEQPMTSEE TRIGAINRVS YCQANTKADF YVAMEGGVDK FEYGPATFAY VVIANHQRES 
IGRGAIMPIP ESVYQALASG EELGPLMDEL FNTQNVKQKG GAIGLLTNGN ATREGNYTHA 
MVLAMAPFLH PELYPVKQ