| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3915 |
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| Symbol | |
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| ID | 4175695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4723477 |
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| End bp | 4725996 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056943 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_663469 |
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| Protein GI | 109900214 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTATC TTGCTAGTGG TAAAATGGCT AATGTCGTTT TTTGGTTAAC CTTCGTGGTG
GGTAGTGCCA TCGGACTATT GCTGTTCAAT CAAGGGGTAT CGTCTTACCG TACCCAAGAG
CTGAACCATG CTCAACAGCA CTTACAGCAA TTTGTCGCCC GATATGATGT GGCCCTGCAA
CAAACCGTTG AACGCAGTAA TAAATTGGCT GATGCGGTAC ATCTCAATAG CCCCTTAAAA
ACAGCCCAAC TAAGTCAATT TATTCATTTG GTTTATCCCA AAGCCAATGA TGTCGCGGAA
ATTTACCTGT TTAGCAATAA TGCTGCCCTG CCGCGCTTTC ACTATTCTCC CGATACCGGA
CTCAGTCAGC TCGTTGACGA ATTAGCTCCC TATATTCAAC CTTACCTTAA GGCCGCAGGT
AAACTGGGGA CAACCCAAAT TTCGCCTATC ATCAACGCAC ATAATTCAGC GGTTAAAGCA
CCAATTATTG TTGTGGTAAA TCCTATCGCT GAAGAAGAGA CAGCTCAAAC AGCAGCAACT
TTTTTGATCA CCGTTCACCA AGTGGCATCC CTGACAGGTG CGCTGCCTAA AGAAGCGGGT
CGTGAAAACT TCGCCTATAT TTTGGCCGAT CACGAGCAAA ACTACTATGT GTTCCCTGAT
AACAAAATGT TCGACAGTAC GCCTAGTATT GATGCAAAAC GTACTGACAT TCCAGACTTA
AATGTACCGC TTAATATACT TGGCAATCAG TGGCAGCTCT GGGTATATCC GCCAACACAA
CATGTTAAAC CGATTGATTT TATTTATTAC GTGTATTTGA CTTTATCTAT CGTCGGTAGC
TTTATGGCCG GTTTTTTATT GCGCTATGCA TTACAACAAC ACAGGGGACT TTACCTACAT
CTCCTGCGAC AATCACGGGA AGTAAAACGC GTTACTCATT CCCTAAAAGA CACTGAAATA
GCGTTAGCAG CCAGTGAAAA AACGGCAGCC TGGGCAGTCA GCGGTCGAAC GCAATTCATG
AACACATTGA GCCATCAAAT CCGCACTCCT GTAAATGGTA TTTTAGGTAT GACCGATTTG
TGCATGCAAA CTGAGTTAAG CCTAAAGCAA CAAGACTACC TACGTAAAAT TACTGCTTCG
GCTGAACATC TTAATTCAGT ATTGGGGGAT TTATCTGATT TCGCGTTGTT GGAATCTGGC
GAACTACAAC TTGCTGAACA GCCGTTCTCA TTGCATGAAA TTGTAGATAG TTTGTACGCC
ATGTTGTCTA AAGAGGCACA AGATAAAGGG TTAGTGTTTA ATATTACGTT GCCCCACACC
GTGCACTGCG ATCTCATTGG AGATCGCAGA CGATTAAGCG AAATTATGCT GAATCTATGC
GCTAATGCTA TTGAGCAAAC TAGCAGTGGC CATATTCATT TAGTCATCAG CACAGACAAC
CAACAAACAG ACCAAGACTC ACTCACACAT GAGAGTGACT ATACGTTAAA CATCATGGTT
ACTGATACAG GGGCTGGCAT TAGTCAAGAA GATATCAACC AACTCTTTAG CCAGGGTCAA
CCGTTAAAGC AGAATCACAA TGCTGGTGGC AGACTAGGCT TAACCATAAG CCAACGATTG
TGCCAGTTGA TGGGCGGTGA AATTGTTGTA TCGAGTCAGC TTGGCATCGG CAGCTGTTTT
ACTGCCAGCG TTAAGTTGAA GCTCAATAAC CTGATCATTA CCTCACCAGA AGAAGTCATG
CAGCTATCGA CGCCGCAACG CATCGTCGTC ATCGATGACA ACCCTATTTC TTTAACCATG
TTAGAACATG CACTCACTAC GATGGGCGCC GAAGTAGCGA CCTTTCAATT TGCCAGTGAT
GCGCTTGAGG CCTTAATAGA GAATGAGCAA CCTGACATTA TTTTACTTGA TTGGGTGATG
CCACAAATAG GCGGCTTAGC ATTTCTATCT CGACTACAAC AATCAAAAGT ACAGATCACC
AGCCGAATAC TGGTCTTAAC CGCCTACGAT GCAAAAAGTA TTTCGCGCAT GACACAGCAA
TTTGCAGTTG AGCGTATTTT GAGTAAACCC TGTCGTAATG AAGAGCTGTT TCACATCATT
GAAAAGACGG AAATGATAGC GAGCGATGAA GACGAGAGCC CATTAGATGG ATTAACCGTG
CTAGTCGCCG AAGACAATAT GATTAACCAA GAGATCATTA GTGAACTTCT GCAACAGGAA
GGGGCTGAAG TGCTTCTTTC GAACGATGGT CAACACTGCA TAGATGAGCT CAAACGCGCA
GAAAAAGTGG ATATTGTATT GATGGATATC AACATGCCCG TCATGAACGG CCTTGCTGCG
TTAAAAGTGA TCCGCGGGGA ATTAGGCATG GCCGATTTAC CGATTGTTGC TCTTACGGCC
AATATATTCG AGCAAGATAA ACAACAGTAC ATACATGCTG GAATGAACGA ACATCTAGGT
AAGCCTTACG ACCGAGACCA AATTGTTCAG TGTATTTTGC GTCTTACTCA AAAAGCATAG
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| Protein sequence | MKYLASGKMA NVVFWLTFVV GSAIGLLLFN QGVSSYRTQE LNHAQQHLQQ FVARYDVALQ
QTVERSNKLA DAVHLNSPLK TAQLSQFIHL VYPKANDVAE IYLFSNNAAL PRFHYSPDTG
LSQLVDELAP YIQPYLKAAG KLGTTQISPI INAHNSAVKA PIIVVVNPIA EEETAQTAAT
FLITVHQVAS LTGALPKEAG RENFAYILAD HEQNYYVFPD NKMFDSTPSI DAKRTDIPDL
NVPLNILGNQ WQLWVYPPTQ HVKPIDFIYY VYLTLSIVGS FMAGFLLRYA LQQHRGLYLH
LLRQSREVKR VTHSLKDTEI ALAASEKTAA WAVSGRTQFM NTLSHQIRTP VNGILGMTDL
CMQTELSLKQ QDYLRKITAS AEHLNSVLGD LSDFALLESG ELQLAEQPFS LHEIVDSLYA
MLSKEAQDKG LVFNITLPHT VHCDLIGDRR RLSEIMLNLC ANAIEQTSSG HIHLVISTDN
QQTDQDSLTH ESDYTLNIMV TDTGAGISQE DINQLFSQGQ PLKQNHNAGG RLGLTISQRL
CQLMGGEIVV SSQLGIGSCF TASVKLKLNN LIITSPEEVM QLSTPQRIVV IDDNPISLTM
LEHALTTMGA EVATFQFASD ALEALIENEQ PDIILLDWVM PQIGGLAFLS RLQQSKVQIT
SRILVLTAYD AKSISRMTQQ FAVERILSKP CRNEELFHII EKTEMIASDE DESPLDGLTV
LVAEDNMINQ EIISELLQQE GAEVLLSNDG QHCIDELKRA EKVDIVLMDI NMPVMNGLAA
LKVIRGELGM ADLPIVALTA NIFEQDKQQY IHAGMNEHLG KPYDRDQIVQ CILRLTQKA
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