Gene Patl_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3908 
Symbol 
ID4175688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4714192 
End bp4714515 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content41% 
IMG OID638056936 
Productcytochrome c, class I 
Protein accessionYP_663462 
Protein GI109900207 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA TAGTTAAGTT TTCTGTACTA AATTTAGCCT TACTATACGC ATTAATAGGT 
GTTAGTAGCG CAGCACAAAA AAGTCCAGAT ATTACAAAAG GCAAAGCTAA ATCAGCAGCC
TGCGCTGCAT GTCACGGAGC ACGCGGTGTT AGCACCAACT CTTTATGGCC TCACCTAGCT
GGGCAAAATA AAGACTACCT CGTCAAGCAA CTACATGATT TTAAAACCGG TAAACGTAGC
GACCCGGTGA TGTCAGGCAT GGCTAAACCA CTTTCAAATG AAGATATCAA TAACCTAGCC
GCTTACTTTT CTAGCCTAAA TTAA
 
Protein sequence
MNKIVKFSVL NLALLYALIG VSSAAQKSPD ITKGKAKSAA CAACHGARGV STNSLWPHLA 
GQNKDYLVKQ LHDFKTGKRS DPVMSGMAKP LSNEDINNLA AYFSSLN