| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3888 |
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| Symbol | |
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| ID | 4175668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4684627 |
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| End bp | 4685646 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056916 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_663442 |
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| Protein GI | 109900187 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATCG ATTGCCATGG CCACTATACT ACCGCGCCAG AGCCTTTACA GTTGTTTCGC
CAAGCGCAGA TCAAGGCTTA TCAGGAAGGT GCAGCCCTAC CGGAAGTCCC ACATATTAGC
GATGATGAAA TTCGCGAGAG CATTGAAAAA AATCAAATAA AATTACTAGA TGAACGTGGT
CTTGATATGA CGATTTTTTC TCCACGTGCC TCAGCAATGG CTCATCATGT GGGCGATGAA
GCCGTATCGA AACAATGGAC TAGTGCCTGC AACGATTTGA TTGCTAGGGT TGTCGAGTTA
TACCCAGAGC GTTTCATTGG CGTGTGCCAG TTACCCCAAT CGGTCGGTGT GCCGATTAAA
AACTCAATTG AAGAGTTAGA GCGCTGCGTA AAAGAAAAAG GTTTTGTTGG TTGTAACCTG
AATCCAGACC CTTCGGGGGG GCACTGGAAT TCGGCACCAT TAACCGACGC TAGTTGGTAT
TCCTTTTACG AAAAAATGGT TGAGCTAGAT GTGCCGGCCA TGATCCACGT GTCAGGCTCG
TGCAACCCTA ATTTTCATGC TACGGGTGCC CACTACATGA ACGCTGATAC CACGGCTTTC
ATGCAGTTTT TAGAAGGAAA TTTGTTTAAA GACTTTCCTA ATTTACGTTT CATTATTCCA
CATGGCGGCG GGGCAGTACC TTATCACTGG GGGCGCTATC GTGGTTTGGC GGATATGATG
AAACAACCAC CACTGCGTGA GCATGTAATG AAAAATGTGT ATTTTGATAC CTGTGTTTAT
CATCAGCCCG GTATCGATTT GCTGTTTAAC GTTATCGATA TTGAAAACAT ACTTTTTGGA
TCTGAAATGA TTGGTGCGGT CCGTGGAATA GACCCAGAAA CGGGCCACTA TTTCGACGAT
ACAAAGCGCT ATGTGGACAG TCTAAATTTG ACGGATACAG AGCGTAGTAA AATATATTCG
GGCAATGCGC GTCGGGTTTA TCCAGGTCTA GATAGAAAAT TAAAAGGCAT GGGGTTATGA
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| Protein sequence | MIIDCHGHYT TAPEPLQLFR QAQIKAYQEG AALPEVPHIS DDEIRESIEK NQIKLLDERG
LDMTIFSPRA SAMAHHVGDE AVSKQWTSAC NDLIARVVEL YPERFIGVCQ LPQSVGVPIK
NSIEELERCV KEKGFVGCNL NPDPSGGHWN SAPLTDASWY SFYEKMVELD VPAMIHVSGS
CNPNFHATGA HYMNADTTAF MQFLEGNLFK DFPNLRFIIP HGGGAVPYHW GRYRGLADMM
KQPPLREHVM KNVYFDTCVY HQPGIDLLFN VIDIENILFG SEMIGAVRGI DPETGHYFDD
TKRYVDSLNL TDTERSKIYS GNARRVYPGL DRKLKGMGL
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