| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3883 |
|---|
| Symbol | |
|---|
| ID | 4175663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 4680524 |
|---|
| End bp | 4681510 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638056911 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_663437 |
|---|
| Protein GI | 109900182 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCAAC GTATTATTGC GCAACAACAG GTATCAGACG TTGGTTTAGG ATGCATGAAT
TTAAGCCATG CCTATGGGCA CCCATTAAGC GAGTCGGAAG CGGCCCGGGT TGTCGCTGAA
GCCCTAGAAT GTGGCATAAC TCATTTCGAT ACCGCGGCGT TATACGGCTT TGGCAAAAAC
GAAATTTTGT TAGGAAAATT GCTTAAGCCA CATCGAAAGA ACCTCTTTCT AGCGAGCAAA
TGTGGCATGA CTGGTGTTAG CGGTAAGCGC GTTATCGATG GTCGCCCTGA GACATTGCGT
CAAACCCTAG AGACGTCACT GACTAGCCTA CAAACTGATG TTATAGACTT GTACTATTTG
CATCGCTGGG ACAAAAGCGT TCCTATTGAA GACAGTGTTG GCGAGCTATC TCGAATGGTT
GACGAGGGCA AAATAAGAGC GGTTGGGCTC AGCGAGGTAT CATCGAAAAC CTTGCGTAAA
GCCCACGCTG TTCACCCCAT TGCTGCGCTT CAAACCGAAT ATTCGTTGTG GAGCAGAAAC
GCAGAAATTT CTGTACTCGA TACCTGCGTC GAACTTGGCA CGGCATTCGT GGCATTTTCA
CCATTGGCTC GTGGGTTTCT TAGTGGAAAG GTAACTGACA TAAACGCATT GGTGGACGGT
GATATACGCA AAAACATGCC TCGATTTCAG GCTTATCATA TGCAACAGAA TCTACCCTTG
TTGACTGAAC TTCGTTCGAT GAGTACAGAG CTGAACTGCA GCATGGCACA ATTGAGCCTT
GCCTGGTTAC TGCATCAAAG CGATCACATA CTTCCCATAC CAGGTACCAC GCAGATTTCA
CATTTACGGG ACAACATCGC AGCGTCTGAT ATATCACTTT CACATTTTCA GATAGAAAAA
TTAGCTCAAC TATTCGATCA TCAAAATATC AGTGGCCCTC GGTATCCTGC TAACACTCAG
CTTGAAATAG ACACAGAAGA GTTCTAA
|
|---|
| Protein sequence | MKQRIIAQQQ VSDVGLGCMN LSHAYGHPLS ESEAARVVAE ALECGITHFD TAALYGFGKN
EILLGKLLKP HRKNLFLASK CGMTGVSGKR VIDGRPETLR QTLETSLTSL QTDVIDLYYL
HRWDKSVPIE DSVGELSRMV DEGKIRAVGL SEVSSKTLRK AHAVHPIAAL QTEYSLWSRN
AEISVLDTCV ELGTAFVAFS PLARGFLSGK VTDINALVDG DIRKNMPRFQ AYHMQQNLPL
LTELRSMSTE LNCSMAQLSL AWLLHQSDHI LPIPGTTQIS HLRDNIAASD ISLSHFQIEK
LAQLFDHQNI SGPRYPANTQ LEIDTEEF
|
|---|
| |