| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3881 |
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| Symbol | |
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| ID | 4175661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4677254 |
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| End bp | 4679086 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638056909 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
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| Protein accession | YP_663435 |
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| Protein GI | 109900180 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGGA TTGTTGGCGC AATAGCCGAA CGTAACGTAG TAGAAATTTT ACTTGAAGGG
CTAAAACGCC TTGAATATCG CGGATACGAT TCTGCTGGTG TTGCCTTACT CGACAACGAG
GGTAACTTAA CCCGCACTCG TCGCATTGGT AAAGTAAAAG AGCTGGCCGA CGCCTTACAT
AACAATCCAG CCAAAGGCAG TGTAGGTATT GCCCACACGC GCTGGGCTAC TCATGGCGGA
GTGACCGAAG CCAATGCTCA CCCGCATTTT TCAAGTGAGC GCATTGCGGT CGTGCACAAC
GGTATCATCG AAAATTACCA ACATCTGCGT GCTGAACTAT CAGCCAAAGG CTATGGTTTC
ACGTCTGACA CTGACACCGA ATCCATTGCG CATCAGGTAC ATTATGAACT AGATCAGGGG
GTAGATTTAC TGCAAGCGGT GCAAATGGCT GTGAGTAAAT TTGATGGGGC ATATGGCACG
GTTATTGTTG ATAAACACGA TCCAGAGCGC ATGATTGTTG CCCGTTCAGG TAGCCCACTC
GTGATTGGTT TTGGTATCGG TGAAAACTTT ATAGCCTCAG ACCAAATGGC ATTGCTGCCT
GTAACTCGTC GCTTTATGTA CCTTGAAGAA GGCGATGTAG CCCAAGTGAC CCGCACCAGC
GTCACCGTGT ACGATCAAAG CGGTCAAGTC GTCGAGCGTG ATATTGTTGA ATCAGATGTA
GAGCACGATG CTGGCGATAA AGCAGGCTAT CGCCATTACA TGCTCAAAGA AATTCATGAG
CAGCCTTCAG TCGTGCGCAA CTGTTTGCAG GGCCGTTTGG GTGAACACGA CATCAGCCCG
AATATTTTTG GTCAAGATGC AGACGAGGTG CTTGCCAACA TCAAGCACGT ACAAATTGTT
GCCTGTGGTA CCAGCTACCA CTCAGGCATG ACCGCCAAAT ATTGGTTAGA AGAATACGCC
AATGTGTCAT GTAACGTTGA AATCGCTTCT GAGTTTCGCT ACCGCAAATC ATTCGTTCAC
CCCAACAGCT TGCTAGTCAC CATTTCTCAG TCAGGTGAAA CGGCTGATAC CCTAGCCGCT
TTACGCCTAG CAAAAAGCTT GGGCTACACC TCAAGCTTAA CCATATGTAA CGTGCCAGGC
TCCTCGCTTG TACGCGAATC AGACCTCGCC TTTATGACCC TTGCAGGGGC AGAAATCGGC
GTGGCGTCGA CCAAAGCGTT TACCACCCAG TTAACCGGTT TCTTAATGTT AACGTTAGCA
TTAGGCAAAC ATAACGGCAT GACAGAGGCC GATCACAAAG CCATTGTTGA TGGTTTACAT
AGTTTGCCAA GCAAACTGGA AGAAACCCTA AGCCTCACCC AAGGCATCAA GGATTTAGCC
GAAGAGTTCG CCGACAAACA GCACAGCTTA TTCCTAGGTC GTGGCGATCA ATACCCGATC
GCTATGGAAG GCGCGCTTAA GCTCAAAGAA ATTTCCTACA TTCACGCAGA AGCCTACGCA
TCTGGCGAAT TAAAGCATGG TCCACTTGCT TTAATCGATG ATGAAATGCC GGTCATCGTA
GTCGCTCCCA ATAATGAGCT GTTAGAAAAG CTAAAATCAA ACGTAGAAGA AGTGCGTGCC
CGCGGCGGCA TCATGTATGT ATTCGCCGAT AAAGAAGCCC ACTTCAAGAG CGATAAAACC
ATGCGCGTGA TCAACGTTCC ACACTGTGAA GCGGCCATCG CCCCAATTAT CTACACCCTG
CCATTACAGT TGCTGTCTTA TTATGTCGCC ATCATCAAAG GCACAGATGT AGACCAACCT
CGGAACCTCG CGAAAAGTGT CACGGTCGAG TAA
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| Protein sequence | MCGIVGAIAE RNVVEILLEG LKRLEYRGYD SAGVALLDNE GNLTRTRRIG KVKELADALH
NNPAKGSVGI AHTRWATHGG VTEANAHPHF SSERIAVVHN GIIENYQHLR AELSAKGYGF
TSDTDTESIA HQVHYELDQG VDLLQAVQMA VSKFDGAYGT VIVDKHDPER MIVARSGSPL
VIGFGIGENF IASDQMALLP VTRRFMYLEE GDVAQVTRTS VTVYDQSGQV VERDIVESDV
EHDAGDKAGY RHYMLKEIHE QPSVVRNCLQ GRLGEHDISP NIFGQDADEV LANIKHVQIV
ACGTSYHSGM TAKYWLEEYA NVSCNVEIAS EFRYRKSFVH PNSLLVTISQ SGETADTLAA
LRLAKSLGYT SSLTICNVPG SSLVRESDLA FMTLAGAEIG VASTKAFTTQ LTGFLMLTLA
LGKHNGMTEA DHKAIVDGLH SLPSKLEETL SLTQGIKDLA EEFADKQHSL FLGRGDQYPI
AMEGALKLKE ISYIHAEAYA SGELKHGPLA LIDDEMPVIV VAPNNELLEK LKSNVEEVRA
RGGIMYVFAD KEAHFKSDKT MRVINVPHCE AAIAPIIYTL PLQLLSYYVA IIKGTDVDQP
RNLAKSVTVE
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