| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3879 |
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| Symbol | |
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| ID | 4175659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4674986 |
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| End bp | 4676347 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056907 |
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| Product | UDP-N-acetylglucosamine pyrophosphorylase |
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| Protein accession | YP_663433 |
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| Protein GI | 109900178 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
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| TIGRFAM ID | [TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.537736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTT CAGTGGTAAT ACTCGCAGCA GGTAAGGGAA CTCGCATGAA GTCTTCCATG
CCGAAGGTTT TACACCCTAT TGGCGCAAAA CCTATGGTGC AGCGCATCAT TGACACCGTA
CATCAATTGG GTGCCGCTTC TATCAATTTA GTATACGGCC ATCAGGCAGA GCAACTACAA
CAAGCTTTGG GCCACAATGC GCTCAATTGG TGCTTACAAG CAGAACAGTT GGGCACTGGC
CACGCTGTGC AGCAAGCGGT GCCACATATT TCTGATGATG AAGATGTGCT TATTCTTGTT
GGCGATGCTC CCCTTATCAA AGCCAATACC CTGCATAATT TGTTGCAAGT AAAAAACAAT
GCCGATGTCG CATTACTGAC TGTCAACGTT GCTGACCCAA CAGGCATGGG GCGTATTATT
CGCCAAGGCG ACAATGTTAC CGCGATTGTT GAGCATAAAG ATGCCAGCGA CGCCCAGCGT
CAAATCTGTG AAATAAACAC AGGTATGATG GTACTTAATG GCAAAGATTT AAAGCGCTGG
CTTGCGAATT TAAATAGCAA CAATGCCCAA GGTGAATTCT ACCTTACCGA TGTCATTGAA
ATGGCAGCCA ATGAAGGAAA AGTCATTAAA GCGGCTCAGC CAAACAGTGA AATTGAGGTC
GAAGGCATCA ATAACCGCAA GCAATTGGCC GCTATCGAGC GCGCATTTCA ATTTGAACAA
GCTCAAGAGC TGATGATGCA AGGTGTTAGT TTGCTTGACC CCCACCGCTT TGACCTGAGG
GGCGACATTA TAGTGGGCCA AGACATCAGC ATAGACGTGA ATGTGGTTAT CGAAGGCACC
GTCAAAATTG GCTCCAATGT CACTATAGGC CCCAACTGCA TACTTAAAGA CTGTGAAATT
GCAGATGGCG CGACTATCGA AGCCAACAGC ATGCTCGATC AAGCCATAGT TGGTGAAAAC
TGCTCGGTTG GCCCATATGC ACGCTTACGC CCAGGTGCGG TGATGCACGA AAATGCACGC
GTTGGCAACT TTGTCGAGAT GAAAAAAACC ACACTAGGCA AAGGCTCAAA AGCCAATCAT
TTAACTTACT TAGGTGATAC TACCGTTGGA ATAGGCGCCA ACATCGGTGC AGGTACCATC
ACCTGTAACT ACGATGGTGT AAACAAGTCT AAAACCATTA TTGGCGACGG CGCATTTATT
GGTTCTAACA GTGCCTTAGT TGCCCCTGTT CAGATTGGTA ATATGGCTAC CGTTGGTGCG
GGCTCGGTGG TAACGAAAAC GGTCGCCGAT CAAGAATTAG CGATTGCTCG AGCAAAACAG
CGAAACGTCA GTGGTTGGCA ACGTCCTACA AAGCCAGAAT AA
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| Protein sequence | MAFSVVILAA GKGTRMKSSM PKVLHPIGAK PMVQRIIDTV HQLGAASINL VYGHQAEQLQ
QALGHNALNW CLQAEQLGTG HAVQQAVPHI SDDEDVLILV GDAPLIKANT LHNLLQVKNN
ADVALLTVNV ADPTGMGRII RQGDNVTAIV EHKDASDAQR QICEINTGMM VLNGKDLKRW
LANLNSNNAQ GEFYLTDVIE MAANEGKVIK AAQPNSEIEV EGINNRKQLA AIERAFQFEQ
AQELMMQGVS LLDPHRFDLR GDIIVGQDIS IDVNVVIEGT VKIGSNVTIG PNCILKDCEI
ADGATIEANS MLDQAIVGEN CSVGPYARLR PGAVMHENAR VGNFVEMKKT TLGKGSKANH
LTYLGDTTVG IGANIGAGTI TCNYDGVNKS KTIIGDGAFI GSNSALVAPV QIGNMATVGA
GSVVTKTVAD QELAIARAKQ RNVSGWQRPT KPE
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