| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3863 |
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| Symbol | |
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| ID | 4175643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4658013 |
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| End bp | 4658831 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638056891 |
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| Product | peptidase M23B |
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| Protein accession | YP_663417 |
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| Protein GI | 109900162 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.826682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CGTCTGGTTT GCTTATTTTT TCTTTTTGCA TTTGTCTTGC GGCTTGTTCA
AGTCGCAAAG CGCCTGCGCC TATTGTTGAG ATTTATCAAG GCAAAACCTT TCGGGATGTT
AAAAAGTCGT CCTATAATGC TCATTCTTAC ACAGTGGAAA AGGGCGATAC GCTCTACACC
ATTTCCTGGA AAAGTGGACA AGATTATCGA GATATTGCAA AATTAAACGG TATTCGACCT
CCGTATAATA TCTTCCCAGG CCAACGTTTA ACGCTCAAAA AATCATCAGG GTCAATAGTT
AAAAGGTCTA ACAATGGCAC TGGTCTGAGT TCAAATTCAA AATCAAATCA AGTAGTTGAC
CCCCCAAAAA AGCAGGCGTA TGGTAAATCT AACGCCACTG TTACAAAAGA GGTAACTACC
TCTTCCGGCA GTGAGTTTCC AAGTAAAATC GCAGCATGGC TATGGCCAAC TAAAAACACC
GTTACACGTG GTTTTTCTAA CACAGAACAC GGCAATAAAG GCTTAGATTT TAACGGAAAC
TTAGGTTCAC CTATTTTGGC GACCGCTGCT GGCAAAGTTG TTTACACAGG GGATGCCCTG
CGTGGATATG GAAAGCTCGT TATAGTGAAA CACTCAGATT CATTTTTGAG CGCTTATGCC
CATAACGATA GTATTCTAGT GAAAGAGCAA CAGTGGGTTA GAGCAGGTCA AAAAATTGCG
ACTATGGGAA AAAGTGGTTC CGACACAGTT AAACTTCATT TTGAAGTGCG CTACAAGGGC
CAGTCTATAG ACCCGCTACG CTATCTGCCT AAACGATAA
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| Protein sequence | MKKSSGLLIF SFCICLAACS SRKAPAPIVE IYQGKTFRDV KKSSYNAHSY TVEKGDTLYT
ISWKSGQDYR DIAKLNGIRP PYNIFPGQRL TLKKSSGSIV KRSNNGTGLS SNSKSNQVVD
PPKKQAYGKS NATVTKEVTT SSGSEFPSKI AAWLWPTKNT VTRGFSNTEH GNKGLDFNGN
LGSPILATAA GKVVYTGDAL RGYGKLVIVK HSDSFLSAYA HNDSILVKEQ QWVRAGQKIA
TMGKSGSDTV KLHFEVRYKG QSIDPLRYLP KR
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