| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3862 |
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| Symbol | |
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| ID | 4175642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4657088 |
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| End bp | 4657972 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056890 |
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| Product | hypothetical protein |
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| Protein accession | YP_663416 |
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| Protein GI | 109900161 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2035] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.887311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGCAG CAGATGCAGT ACCTGGCGTA TCTGGTGGCA CAATTGCATT TATCACGGGT
ATTTACGAAG AGCTCATTTA CTCGTTAAAG CAATGCGGGC CAGAGGCGTT AAACGTTCTT
TTTCGTCAAG GCTTTGCTGC GATGTGGAAG CATATTAATG GCGCTTTTTT ACTGACGTTA
CTCATGGGCA TTATGCTAAG CATCTTCACC ATATCACGGT TGGTCTTATA CTGGCTTGAT
GCCTACCCAG TGATGTTGTG GTCTTTCTTC TTTGGCTTAA TATTGGCAGC AATTTGGTCC
CTAATACGGC ATATTGAATC TTGGGATGTA AAAACTATCG CTTTCTTTGC CGTGGGCACG
CTTGCCGCGT ATCTGATTAC AATGATCCCC CCTAGCGCGA TTGAACCGAC TAAGTTATTT
ATCTTTTTAT CCGGAATGCT TGCCATTTGC GCCATGATTT TACCCGGTAT TTCAGGCAGC
TTTATTTTGC TTTTACTGGG TATGTATACG CATATTCTAA CTGCGGTGAA AGATCTCGAT
ATAGTGACAT TGGCTCTGTT TGCCATCGGT TGCGTATTTG GGTTATTAAG CTTTTCTCGC
GTATTGAACT GGATGTTTAA TTCCCATAAA ACACTCACGT TAGCGCTACT GGGCGGTTTT
ATGTTGGGTT CGCTGAACAA AGTATGGCCC TGGAAGCTGA CTATAGAATC AACAGTAAAC
AGTCACGGTA AAACGATCCC CCTAGTGCAA GAAAATATAT TACCCGGCAC ATTCGAGGTA
TTAACAAGTC AGCCTTCTTA TCTATGGTAT GCCATCGCAT TGAGTCTATT CGGTGCTGGC
GCAGTATTAC TTTTAGAAAA AGTAGGCTCT GCCCCTCGGG AATAA
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| Protein sequence | MGAADAVPGV SGGTIAFITG IYEELIYSLK QCGPEALNVL FRQGFAAMWK HINGAFLLTL
LMGIMLSIFT ISRLVLYWLD AYPVMLWSFF FGLILAAIWS LIRHIESWDV KTIAFFAVGT
LAAYLITMIP PSAIEPTKLF IFLSGMLAIC AMILPGISGS FILLLLGMYT HILTAVKDLD
IVTLALFAIG CVFGLLSFSR VLNWMFNSHK TLTLALLGGF MLGSLNKVWP WKLTIESTVN
SHGKTIPLVQ ENILPGTFEV LTSQPSYLWY AIALSLFGAG AVLLLEKVGS APRE
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