| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3838 |
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| Symbol | |
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| ID | 4175618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4633398 |
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| End bp | 4634276 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056866 |
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| Product | drug/metabolite exporter family protein |
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| Protein accession | YP_663392 |
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| Protein GI | 109900137 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0125925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGT GGATCCCGTT TACCGTGATG GCTGCGTTCA TGCAATCATG GCGAAATGCA
TTTCAAAAGC GCCTCAGTGC TGACGTAGAC ACGTTAGGTG TCACCCTTGC TCGCTTTATT
CTTGCCGTCC CCATGGCTGC CCTCTACGCA TTTGTCCTTT TCTCTATTGA GGATAGCGCC
GTCCCACAAA TGAATCCCAA GTTCTATCTC GCCATAGTAC TAGCTGCTAT ATCGCAAATT
TTTGCTACCG CGTTAATGGT CAAACTTTTC CGCTTACGAA ATTATGCAAT GGGTGTGGGG
TTAGCCAAGA GCGAGGCCGT CATTGCTGCC ATTTTAGGTG CGCTGCTTTT TGCTGCCCCT
TTGTCAGCAA TGGCTTGGTG TGGCGTAATA ATAGGCGGCA TGGCCGTATG GTTAATGAGT
GTGCCTAAAG GCATGCGGGA TATCTCTTGG CCTACACTGC TTATCGGCTT AGCCAGCGGA
CTATGCTTTG CGTTGACCAC CTTATGGGTA CGAGAAGCAA GCCTAATGAC GCAGCTACCG
TTTTTACAAA GCGCAGCATA TGTCTTATTT TGGGTTTTGC TGATACAAAC CCTCATTCTA
TTGCTTTGGC TACTCATTCG TAGCCCACAA ACTTTGCGCG CCTTGTGCCT AAAGCCTAAA
TTGGTTTTTA TCATCAGTTT TTGTAGCTTT GTCGGCTCAA TTGGCTGGTT CACCGCTATG
AGTTTAGAAA CCGTAGCCTT GGTTAAAACC CTAGGCCAGA TTGAGATATT CTTTACCTTA
CTGATATCTG CGAAATGGTT TAAGGAGCGA TTACAGCGTT CTGACAAGTG GGGCCTTGGG
TTAATTCTAG TTGGTGCAGT GCTGGTCATA CTCGCCTAA
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| Protein sequence | MSLWIPFTVM AAFMQSWRNA FQKRLSADVD TLGVTLARFI LAVPMAALYA FVLFSIEDSA
VPQMNPKFYL AIVLAAISQI FATALMVKLF RLRNYAMGVG LAKSEAVIAA ILGALLFAAP
LSAMAWCGVI IGGMAVWLMS VPKGMRDISW PTLLIGLASG LCFALTTLWV REASLMTQLP
FLQSAAYVLF WVLLIQTLIL LLWLLIRSPQ TLRALCLKPK LVFIISFCSF VGSIGWFTAM
SLETVALVKT LGQIEIFFTL LISAKWFKER LQRSDKWGLG LILVGAVLVI LA
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