| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3823 |
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| Symbol | |
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| ID | 4175603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4617095 |
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| End bp | 4618690 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056851 |
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| Product | levanase |
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| Protein accession | YP_663377 |
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| Protein GI | 109900122 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.107352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGG TTATGTTAGG CCTAATGGCT AGCGTATTAC TCGGATGTTC AGGCCAGTCA
TCCACAAATC CAGCATCTGA ACGTGTCAAT TCGGATAGCA GTATGCAAAG TAACGAAAAA
CACCGACCAA ACTTTCATTT TTCGCCCCCC GCCAACTGGA TGAACGACCC AAATGGCATG
GTGTATTACG CGGGCGAATA TCACTTATTT TACCAGTACC ACCCGGGGTC AACCATTTGG
GGCCCCATGC ACTGGGGACA TGCGGTTAGC AAAGACATGC TGAATTGGCA GCACCTTCCA
GTTGCATTAT ATCCAGATGA ATTAGGCACT ATTTTTTCAG GTAGCGTAGT GGTTGACTGG
GAAAACACAT CCGGATTGGG CACAAAAGAC AACCCTCCTA TGGTTGCGCT ATTCACCTAC
CATGATGTTG CAGGAGAACA AGCAGGAACG CTCGACTTTC AAACCCAAGG GCTAGCGTTT
AGTTTGGACA AAGGCCGAAC ATGGACTAAA TATAGTCAAA ATCCAGTGAT GAAAAACCCT
GGTTTAAAGG ATTACCGTGA CCCGAAAGTA TCTTGGTACG CCCCACAGAA AAAATGGATT
ATGGCATTGG CGCAAGGCGA TAATATTGGC TTTCACTCAT CGAAAAATCT GATCGACTGG
CAAGCTGAAA GTACATTTGG CGAAAAAATA GGAGCCCATG GCGGCGTATG GGAATGCCCT
GATTTGTTGG AGATGACAAT TACCAGTACG GGTGAGACAA AGCACGTATT ACTGGTGAGC
TTAGTCCCAG GGGCACCCAA CGGAGGTTCA GGTACCCAAT ATTTTGTGGG TGACTTTGAC
GGGAGTAAAT TCACCGTTGA TCCTGAATTC TCTGAGCGTT TAGAGCAAAA AGAAGCTATA
TGGCTTGATT ACGGCACAGA CAACTATGCC GGCGTCACAT TCTCTAATGT GCCAGATACG
GACGGGCGCA CGTTATTTAT GGGTTGGATG AACAACTGGC TTTACGCAAG AGACGTCCCT
ACCGATGCAT GGCGTGGCAG TATGACAACT CCGCGTAACC TAGTGTTACA AGAGACGGCA
CTAGGCCCAC TTCTTTTCTC TCAACCCATC ACTGAACTTC ACAATATAAG CCATCAAGTC
GCACAGCTTA ATAATGTTGA AGTAAGCAGC GACACTGATT TATCTGCATT ACTCGGTCCA
ATAGAGGAAT CGCACCGCGT CACTATGAAG GTGAAAAGGC AAGGCGCGAA TACATTGTCG
TTAGATTACA AAAATAACGA CGAACTGCTT TCAATACGCC TTGATGTAAA CGCCGGTACT
GTAACGATCG ATCGTGCAAA ATCTGGTGAG ACAGAATTTG AAGAACATTT TGCCAACCAA
CAAGTGGGTG TAATTCGTGC TGGATTAGAC ACCTACTCGT TCGATATCAT TTATGACAAG
GCATCAATCG AACTGTTCGT TAATGACGGA GAGTTGTCGA TGACAGCGCT TGCTTTCCCG
TCAACGCCGT ACAATGAAAT TACGTTTTCA GCCGATGGAC AAGCCCTAAT CGAGCACATC
AGTCTGGACA ACCTCACGGC GCAACAAGCC AAGTAG
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| Protein sequence | MKTVMLGLMA SVLLGCSGQS STNPASERVN SDSSMQSNEK HRPNFHFSPP ANWMNDPNGM
VYYAGEYHLF YQYHPGSTIW GPMHWGHAVS KDMLNWQHLP VALYPDELGT IFSGSVVVDW
ENTSGLGTKD NPPMVALFTY HDVAGEQAGT LDFQTQGLAF SLDKGRTWTK YSQNPVMKNP
GLKDYRDPKV SWYAPQKKWI MALAQGDNIG FHSSKNLIDW QAESTFGEKI GAHGGVWECP
DLLEMTITST GETKHVLLVS LVPGAPNGGS GTQYFVGDFD GSKFTVDPEF SERLEQKEAI
WLDYGTDNYA GVTFSNVPDT DGRTLFMGWM NNWLYARDVP TDAWRGSMTT PRNLVLQETA
LGPLLFSQPI TELHNISHQV AQLNNVEVSS DTDLSALLGP IEESHRVTMK VKRQGANTLS
LDYKNNDELL SIRLDVNAGT VTIDRAKSGE TEFEEHFANQ QVGVIRAGLD TYSFDIIYDK
ASIELFVNDG ELSMTALAFP STPYNEITFS ADGQALIEHI SLDNLTAQQA K
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